Suppr超能文献

冷适应和暖适应贻贝(贻贝属)酶的温度适应功能决定因素。

Functional determinants of temperature adaptation in enzymes of cold- versus warm-adapted mussels (Genus Mytilus).

机构信息

Hopkins Marine Station, Stanford University, USA.

出版信息

Mol Biol Evol. 2012 Oct;29(10):3061-70. doi: 10.1093/molbev/mss111. Epub 2012 Apr 6.

Abstract

Temperature is a strong selective force on the evolution of proteins due to its effects on higher orders of protein structure and, thereby, on critical protein functions like ligand binding and catalysis. Comparisons among orthologous proteins from differently thermally adapted species show consistent patterns of adaptive variation in function, but few studies have examined functional adaptation among multiple structural families of proteins. Thus, with our present state of knowledge, it is difficult to predict what fraction of the proteome will exhibit adaptive variation in the face of temperature increases of a few to several degrees Celsius, that is, temperature increases of the magnitude predicted by models of global warming. Here, we compared orthologous enzymes of the warm-adapted Mediterranean mussel Mytilus galloprovincialis and the cold-adapted Mytilus trossulus, a native of the North Pacific Ocean, species whose physiologies exhibit significantly different responses to temperature. We measured the effects of temperature on the kinetics (Michaelis-Menten constant-K(m)) of five enzymes that are important for ATP generation and that represent distinct protein structural families. Among phosphoglucomutase (PGM), phosphoglucose isomerase (PGI), pyruvate kinase (PK), phosphoenolpyruvate carboxykinase (GTP) (PEPCK), and isocitrate dehydrogenase (NADP) (IDH), only IDH orthologs showed significantly different thermal responses of K(m) between the two species. The K(m) of isocitrate of M. galloprovincialis-IDH was intrinsically lower and more thermally stable than that of M. trossulus-IDH and thus had higher substrate affinity at high temperatures. Two amino acid substitutions account for the functional differences between IDH orthologs, one of which allows for more hydrogen bonds to form near the mobile region of the active site in M. galloprovincialis-IDH. Taken together, our findings cast light on the targets of adaptive evolution in the context of climate change; only a minority of proteins might adapt to small changes in temperature, and these adaptations may involve only small changes in sequence.

摘要

温度对蛋白质进化是一个强有力的选择因素,因为它会影响蛋白质的高级结构,从而影响关键的蛋白质功能,如配体结合和催化。比较来自不同热适应物种的同源蛋白质,显示出功能上一致的适应性变异模式,但很少有研究检查蛋白质多个结构家族之间的功能适应。因此,根据我们目前的知识水平,很难预测在面对几度到几度的温度升高时,蛋白质组中有多少会表现出适应性变异,也就是说,在全球变暖模型预测的温度升高范围内,有多少蛋白质会表现出适应性变异。在这里,我们比较了来自暖水地中海贻贝 Mytilus galloprovincialis 和冷水贻贝 Mytilus trossulus 的同源酶,这是北太平洋的本地物种,其生理对温度的反应明显不同。我们测量了温度对 5 种重要的 ATP 生成酶的动力学(米氏常数-K(m))的影响,这些酶代表不同的蛋白质结构家族。在磷酸葡糖变位酶(PGM)、磷酸葡萄糖异构酶(PGI)、丙酮酸激酶(PK)、磷酸烯醇丙酮酸羧激酶(GTP)(PEPCK)和异柠檬酸脱氢酶(NADP)(IDH)中,只有 IDH 同源物在两个物种之间表现出 K(m)的明显不同的热响应。M. galloprovincialis-IDH 的异柠檬酸 K(m)本质上较低,且更耐热稳定,因此在高温下具有更高的底物亲和力。两个氨基酸取代解释了 IDH 同源物之间的功能差异,其中一个允许在 M. galloprovincialis-IDH 的活性部位可移动区域附近形成更多氢键。总的来说,我们的研究结果揭示了在气候变化背景下适应性进化的目标;只有少数蛋白质可能适应温度的微小变化,并且这些适应可能只涉及序列的微小变化。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验