Cavinder Brad, Sikhakolli Usha, Fellows Kayla M, Trail Frances
Genetics Program, Michigan State University, USA.
J Vis Exp. 2012 Mar 29(61):3895. doi: 10.3791/3895.
Fusarium graminearum has become a model system for studies in development and pathogenicity of filamentous fungi. F. graminearum most easily produces fruiting bodies, called perithecia, on carrot agar. Perithecia contain numerous tissue types, produced at specific stages of perithecium development. These include (in order of appearance) formation of the perithecium initials (which give rise to the ascogenous hyphae), the outer wall, paraphyses (sterile mycelia which occupy the center of the perithecium until the asci develop), the asci, and the ascospores within the asci. The development of each of these tissues is separated by approximately 24 hours and has been the basis of transcriptomic studies during sexual development. Refer to Hallen et al. (2007) for a more thorough description of development, including photographs of each stage. Here, we present the methods for generating and harvesting synchronously developing lawns of perithecia for temporal studies of gene regulation, development, and physiological processes. Although these methods are written specifically to be used with F. graminearum, the techniques can be used for a variety of other fungi, provided that fruiting can be induced in culture and there is some synchrony to development. We have recently adapted this protocol to study the sexual development of F. verticillioides. Although individual perithecia must be hand picked in this species, because a lawn of developing perithecia could not be induced, the process worked well for studying development (Sikhakolli and Trail, unpublished). The most important function of fungal fruiting bodies is the dispersal of spores. In many of the species of Ascomycota (ascus producing fungi), spores are shot from the ascus, due to the generation of turgor pressure within the ascus, driving ejection of spores (and epiplasmic fluid) through the pore in the ascus tip. Our studies of forcible ascospore discharge have resulted in development of a "spore discharge assay", which we use to screen for mutations in the process. Here we present the details of this assay. F. graminearum is homothallic, and thus can form fruiting bodies in the absence of a compatible partner. The advantage of homothallism is that crossing is not necessary to generate offspring homozygous for a particular trait, a facet that has facilitated the study of sexual development in this species. However, heterothallic strains have been generated that can be used for crossing. It is also possible to cross homothallic strains to obtain mutants for several genes in one strain. This is done by coinoculating one Petri dish with 2 strains. Along the meeting point, the majority of perithecia will be recombinant (provided a mutation in one of the parent strains does not inhibit outcrossing). As perithecia age, they exude ascospores en masse instead of forcibly discharging them. The resulting spore exudate (called a cirrhus) sits at the tip of the perithecium and can easily be removed for recovery of individual spores. Here we present a protocol to facilitate the identification of recombinant perithecia and the recovery of recombinant progeny.
禾谷镰刀菌已成为丝状真菌发育和致病性研究的模式系统。禾谷镰刀菌在胡萝卜琼脂培养基上最容易产生子囊壳这种子实体。子囊壳包含多种组织类型,在子囊壳发育的特定阶段产生。这些组织(按出现顺序)包括子囊壳原基的形成(产生产囊丝)、外壁、侧丝(在子囊发育之前占据子囊壳中心的不育菌丝)、子囊以及子囊内的子囊孢子。这些组织的每个发育阶段间隔约24小时,这一直是有性发育过程中转录组学研究的基础。有关发育的更详细描述,包括每个阶段的照片,请参考哈伦等人(2007年)的研究。在此,我们介绍用于生成和收获同步发育的子囊壳菌苔以进行基因调控、发育和生理过程的时间研究的方法。尽管这些方法是专门为禾谷镰刀菌编写的,但只要能在培养中诱导出子实体且发育有一定同步性,这些技术可用于多种其他真菌。我们最近已调整此方案以研究轮枝镰刀菌的有性发育。尽管在该物种中必须手工挑选单个子囊壳,因为无法诱导出子囊壳菌苔,但该过程在研究发育方面效果良好(西哈科利和特雷尔,未发表)。真菌子实体的最重要功能是孢子传播。在许多子囊菌门(产生子囊的真菌)物种中,由于子囊内膨压的产生,孢子从子囊中射出,推动孢子(和周质流体)通过子囊顶端的孔排出。我们对强力子囊孢子弹射的研究促成了一种“孢子弹射测定法”的开发,我们用它来筛选该过程中的突变。在此我们介绍该测定法的详细信息。禾谷镰刀菌是同宗配合的,因此在没有相容配偶的情况下也能形成子实体。同宗配合的优势在于无需杂交就能产生特定性状纯合的后代,这一特点促进了该物种有性发育的研究。然而,也已产生可用于杂交的异宗配合菌株。也可以将同宗配合菌株杂交以在一个菌株中获得多个基因的突变体。这是通过在一个培养皿中同时接种2个菌株来完成的。沿着交汇点,大多数子囊壳将是重组的(前提是亲本菌株之一的突变不抑制异交)。随着子囊壳老化,它们会大量释放子囊孢子而不是强力弹射孢子。产生的孢子渗出物(称为卷须)位于子囊壳顶端,可以很容易地去除以回收单个孢子。在此我们介绍一个便于鉴定重组子囊壳和回收重组后代的方案。