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白色瘤胃球菌SY3内切葡聚糖酶基因celA和celB的核苷酸序列。

Nucleotide sequence of the Ruminococcus albus SY3 endoglucanase genes celA and celB.

作者信息

Poole D M, Hazlewood G P, Laurie J I, Barker P J, Gilbert H J

机构信息

Department of Agricultural Biochemistry and Nutrition, University of Newcastle upon Tyne, UK.

出版信息

Mol Gen Genet. 1990 Sep;223(2):217-23. doi: 10.1007/BF00265057.

Abstract

The complete nucleotide sequences of Ruminococcus albus genes celA and celB coding for endoglucanase A (EGA) and endoglucanase B (EGB), respectively, have been determined. The celA structural gene consists of an open reading frame of 1095 bp. Confirmation of the nucleotide sequence was obtained by comparing the predicted amino acid sequence with that derived by N-terminal analysis of purified EGA. The celB structural gene consists of an open reading frame of 1227 bp; 7 bp upstream of the translational start codon of celB is a typical gram-positive Shine-Dalgarno sequence. The deduced N-terminal region of EGB conforms to the general pattern for the signal peptides of secreted prokaryotic proteins. The complete celB gene, cloned into pUC vectors, caused lethality in Escherichia coli. In contrast, celA cloned in pUC18, under the control of lacZp, directed high-level synthesis of EGA in E. coli JM83. EGA in cell-free extract, purified to near homogeneity by ion-exchange chromatography, had a Mr of 44.5 kDa. Gene deletion and subcloning studies with celA revealed that EGA hydrolysed both CMC and xylan, and did not contain discrete functional domains. EGA and EGB showed considerable homology with each other, in addition to exhibiting similarity with Eg1 (R. albus), EGE (Clostridium thermocellum) and End (Butyrivibrio fibrisolvens).

摘要

分别编码内切葡聚糖酶A(EGA)和内切葡聚糖酶B(EGB)的白瘤胃球菌基因celA和celB的完整核苷酸序列已被测定。celA结构基因由一个1095 bp的开放阅读框组成。通过将预测的氨基酸序列与通过纯化的EGA的N端分析得到的氨基酸序列进行比较,确认了核苷酸序列。celB结构基因由一个1227 bp的开放阅读框组成;在celB翻译起始密码子上游7 bp处是一个典型的革兰氏阳性Shine-Dalgarno序列。推导的EGB的N端区域符合分泌型原核蛋白信号肽的一般模式。克隆到pUC载体中的完整celB基因在大肠杆菌中具有致死性。相反,克隆在pUC18中、受lacZp控制的celA在大肠杆菌JM83中指导EGA的高水平合成。通过离子交换色谱纯化至接近均一的无细胞提取物中的EGA,其Mr为44.5 kDa。对celA进行基因缺失和亚克隆研究表明,EGA能水解羧甲基纤维素(CMC)和木聚糖,且不包含离散的功能域。EGA和EGB彼此之间具有相当高的同源性,此外,它们与Eg1(白瘤胃球菌)、EGE(嗜热栖热放线菌)和End(溶纤维丁酸弧菌)也具有相似性。

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