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从夏威夷环境水中增强检测肠道病毒的新方法。

New approaches for enhanced detection of enteroviruses from Hawaiian environmental waters.

机构信息

Departments of Public Health Sciences and Microbiology, University of Hawaii at Manoa, Honolulu, Hawaii, United States of America.

出版信息

PLoS One. 2012;7(5):e32442. doi: 10.1371/journal.pone.0032442. Epub 2012 May 2.

Abstract

Health risks associated with sewage-contaminated recreational waters are of important public health concern. Reliable water monitoring systems are therefore crucial. Current recreational water quality criteria rely predominantly on the enumeration of bacterial indicators, while potentially dangerous viral pathogens often remain undetected. Human enteric viruses have been proposed as alternative indicators; however, their detection is often hindered by low viral concentrations present in the environment. Reported here are novel and effective laboratory protocols for viral concentration and highly sensitive and optimized RT-PCR for the efficient detection of enteroviruses, an important enteric virus subset, in Hawaiian environmental waters. Eighteen published enterovirus primer pairs were comparatively evaluated for detection sensitivity. The primer set exhibiting the lowest detection limit under optimized conditions, EQ-1/EQ-2, was validated in a field survey of 22 recreational bodies of water located around the island of Oahu, Hawaii. Eleven sites tested positive for enterovirus, indicating fecal contamination at these locations. As an additional means of viral concentration, shellfish were collected from 9 sample sites and subjected to dissection, RNA extraction, and subsequent RT-PCR. Shellfish tissue from 6 of 9 sites tested positive for enterovirus. The techniques implemented here are valuable resources to aid accurate reflection of microbial contamination in Hawaii's environmental waters.

摘要

与污水污染的娱乐水域相关的健康风险是重要的公共卫生关注点。因此,可靠的水质监测系统至关重要。目前的娱乐水质标准主要依赖于细菌指标的计数,而潜在的危险病毒病原体往往未被检测到。人类肠道病毒已被提议作为替代指标;然而,由于环境中存在的病毒浓度较低,它们的检测常常受到阻碍。本文报道了用于病毒浓缩的新颖且有效的实验室方案,以及用于高效检测肠道病毒(肠道病毒的一个重要亚组)的高度敏感和优化的 RT-PCR。对 18 种已发表的肠道病毒引物对进行了检测灵敏度的比较评估。在优化条件下,检测限最低的引物对 EQ-1/EQ-2 经奥阿胡岛(夏威夷)22 个娱乐水体的现场调查进行了验证。11 个地点检测出肠道病毒呈阳性,表明这些地点存在粪便污染。作为病毒浓缩的另一种方法,从 9 个采样点采集贝类,并进行解剖、RNA 提取和随后的 RT-PCR。来自 9 个地点中的 6 个贝类组织检测出肠道病毒呈阳性。这里实施的技术是准确反映夏威夷环境水中微生物污染的有价值的资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/38cc/3342282/4d99dec88f71/pone.0032442.g001.jpg

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