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利用图像数据库 LIPS 对拟南芥保卫细胞进行统计细胞器剖析。

Statistical organelle dissection of Arabidopsis guard cells using image database LIPS.

机构信息

Department of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwanoha Kashiwa, Chiba 277-8562, Japan.

出版信息

Sci Rep. 2012;2:405. doi: 10.1038/srep00405. Epub 2012 May 11.

Abstract

To comprehensively grasp cell biological events in plant stomatal movement, we have captured microscopic images of guard cells with various organelles markers. The 28,530 serial optical sections of 930 pairs of Arabidopsis guard cells have been released as a new image database, named Live Images of Plant Stomata (LIPS). We visualized the average organellar distributions in guard cells using probabilistic mapping and image clustering techniques. The results indicated that actin microfilaments and endoplasmic reticulum (ER) are mainly localized to the dorsal side and connection regions of guard cells. Subtractive images of open and closed stomata showed distribution changes in intracellular structures, including the ER, during stomatal movement. Time-lapse imaging showed that similar ER distribution changes occurred during stomatal opening induced by light irradiation or femtosecond laser shots on neighboring epidermal cells, indicating that our image analysis approach has identified a novel ER relocation in stomatal opening.

摘要

为了全面掌握植物气孔运动中的细胞生物学事件,我们使用各种细胞器标记物对保卫细胞进行了微观成像。现已发布一个新的图像数据库,名为“植物气孔活细胞图像(LIPS)”,其中包含 930 对拟南芥保卫细胞的 28530 张连续光学切片。我们使用概率映射和图像聚类技术来可视化保卫细胞中细胞器的平均分布。结果表明,肌动蛋白微丝和内质网(ER)主要定位于保卫细胞的背侧和连接区域。开闭气孔的减影图像显示,在气孔运动过程中,细胞内结构(包括 ER)的分布发生变化。延时成像显示,光照射或飞秒激光脉冲刺激邻近表皮细胞诱导气孔张开时,也发生类似的 ER 分布变化,表明我们的图像分析方法已鉴定出一种在气孔张开过程中内质网的重新定位。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8b1/3349934/24e2456acded/srep00405-f1.jpg

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