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ABO 血型 SNP rs505922 与乳腺癌表型的关系:一项基因型-表型相关性研究。

Relationships between the ABO blood group SNP rs505922 and breast cancer phenotypes: a genotype-phenotype correlation study.

机构信息

Clinical Breast Care Project, Henry M. Jackson Foundation for the Advancement of Military Medicine, Windber, USA.

出版信息

BMC Med Genet. 2012 May 29;13:41. doi: 10.1186/1471-2350-13-41.

DOI:10.1186/1471-2350-13-41
PMID:22642827
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3514387/
Abstract

BACKGROUND

To date, evaluation of the association of the ABO blood group and breast cancer has yielded mixed results. SNP rs505922, located within the first intron of the ABO gene, has been associated with the adenocarcinoma subtype of pancreatic cancer. To evaluate the association between genetic variation in the ABO blood group and risk of breast cancer, rs505922 was genotyped in 629 Caucasian women with invasive breast cancer, representing a variety of clinical and pathological tumor types.

METHODS

Genomic DNA was isolated from blood. TaqMan SNP assay C_2253769_10 was used to determine genotypes for each patient at rs505922. Statistical analysis was performed using chi-square analysis using a P-value <0.05 to define significance.

RESULTS

Genotypes were generated for 100% of the 629 patients in this study. Allele and genotype frequencies did not vary significantly for age at diagnosis, tumor stage, size or grade, hormone, HER2 or lymph node status, intrinsic subtype, tumor type or patient outcome.

CONCLUSIONS

Allele frequencies for rs505922 did not differ between women with breast cancer and published HapMap frequencies from women of European descent. Further stratification into different tumor phenotypes also failed to reveal an association between rs505922 and any clinical characteristics. Together, these data suggest that the minor allele of rs505922 and the resulting non-O blood types are not associated with increased risk or less favorable tumor characteristics or prognosis in breast cancer.

摘要

背景

迄今为止,ABO 血型与乳腺癌相关性的评估结果喜忧参半。SNP(rs505922)位于 ABO 基因的第一内含子内,与胰腺癌的腺癌亚型相关。为了评估 ABO 血型基因变异与乳腺癌风险之间的关联,对 629 名患有浸润性乳腺癌的白种女性(rs505922)进行了基因分型,这些女性代表了各种临床和病理肿瘤类型。

方法

从血液中提取基因组 DNA。使用 TaqMan SNP 检测 C_2253769_10 对每个患者的 rs505922 进行基因分型。使用卡方检验分析进行统计分析,P 值<0.05 定义为有统计学意义。

结果

本研究中 629 例患者的基因型均生成。在诊断时的年龄、肿瘤分期、大小或分级、激素、HER2 或淋巴结状态、内在亚型、肿瘤类型或患者预后方面,等位基因和基因型频率没有显著差异。

结论

rs505922 的等位基因频率在乳腺癌女性与欧洲裔女性的 HapMap 频率之间没有差异。进一步分层为不同的肿瘤表型也未能显示 rs505922 与任何临床特征之间的关联。这些数据表明,rs505922 的次要等位基因和由此产生的非 O 血型与乳腺癌的风险增加或肿瘤特征或预后不良无关。

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本文引用的文献

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A map of human genome variation from population-scale sequencing.人类基因组变异的图谱来自于基于人群的测序。
Nature. 2010 Oct 28;467(7319):1061-73. doi: 10.1038/nature09534.
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Risk of gastric cancer and peptic ulcers in relation to ABO blood type: a cohort study.ABO 血型与胃癌和消化性溃疡风险的关系:一项队列研究。
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Genome-wide association study identifies variants in the ABO locus associated with susceptibility to pancreatic cancer.全基因组关联研究确定ABO基因座中的变异与胰腺癌易感性相关。
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Population-based genome-wide association studies reveal six loci influencing plasma levels of liver enzymes.基于人群的全基因组关联研究揭示了影响肝脏酶血浆水平的六个基因座。
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Novel association of ABO histo-blood group antigen with soluble ICAM-1: results of a genome-wide association study of 6,578 women.ABO组织血型抗原与可溶性细胞间黏附分子-1的新型关联:一项对6578名女性的全基因组关联研究结果
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