Department of Molecular Structure, Centro Nacional de Biotecnologia, Consejo Superior de Investigaciones Cientificas, E-28049 Madrid, Spain.
Proc Natl Acad Sci U S A. 2012 Jun 12;109(24):9390-5. doi: 10.1073/pnas.1119719109. Epub 2012 May 29.
The six bacteriophage T7 tail fibers, homo-trimers of gene product 17, are thought to be responsible for the first specific, albeit reversible, attachment to Escherichia coli lipopolysaccharide. The protein trimer forms kinked fibers comprised of an amino-terminal tail-attachment domain, a slender shaft, and a carboxyl-terminal domain composed of several nodules. Previously, we expressed, purified, and crystallized a carboxyl-terminal fragment comprising residues 371-553. Here, we report the structure of this protein trimer, solved using anomalous diffraction and refined at 2 Å resolution. Amino acids 371-447 form a tapered pyramid with a triangular cross-section composed of interlocked β-sheets from each of the three chains. The triangular pyramid domain has three α-helices at its narrow end, which are connected to a carboxyl-terminal three-blade β-propeller tip domain by flexible loops. The monomers of this tip domain each contain an eight-stranded β-sandwich. The exact topology of the β-sandwich fold is novel, but similar to that of knob domains of other viral fibers and the phage Sf6 needle. Several host-range change mutants have been mapped to loops located on the top of this tip domain, suggesting that this surface of the tip domain interacts with receptors on the cell surface.
六个噬菌体 T7 尾丝由基因产物 17 形成的同源三聚体,被认为是负责与大肠杆菌脂多糖进行首次特异性结合的物质,尽管这种结合是可逆的。该蛋白三聚体形成了扭曲的纤维,由氨基末端尾附着结构域、细长的轴和由几个小结组成的羧基末端结构域组成。以前,我们表达、纯化并结晶了包含残基 371-553 的羧基末端片段。在这里,我们报告了该蛋白三聚体的结构,该结构是通过异常衍射解决的,并在 2Å分辨率下进行了精修。残基 371-447 形成一个锥形金字塔,其三角形横截面由三个链上的互锁β-折叠组成。三角形金字塔结构域在其狭窄的末端有三个α-螺旋,通过柔性环与羧基末端三叶β-桨叶尖端结构域相连。该尖端结构域的单体各包含一个八链β-三明治。β-三明治折叠的精确拓扑结构是新颖的,但与其他病毒纤维和 Sf6 噬菌体针的旋钮结构域相似。已经将几个宿主范围改变的突变体映射到位于该尖端结构域顶部的环上,这表明尖端结构域的这个表面与细胞表面上的受体相互作用。