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模拟黄石国家公园光合生物的栖息地范围:迈向全面适应度景观的发展

Modeling the habitat range of phototrophs in yellowstone national park: toward the development of a comprehensive fitness landscape.

作者信息

Boyd Eric S, Fecteau Kristopher M, Havig Jeff R, Shock Everett L, Peters John W

机构信息

Department of Chemistry and Biochemistry, Astrobiology Biogeocatalysis Research Center, Montana State University Bozeman, MT, USA.

出版信息

Front Microbiol. 2012 Jun 18;3:221. doi: 10.3389/fmicb.2012.00221. eCollection 2012.

Abstract

The extent to which geochemical variation shapes the distribution of phototrophic metabolisms was modeled based on 439 observations in geothermal springs in Yellowstone National Park (YNP), Wyoming. Generalized additive models (GAMs) were developed to predict the distribution of phototrophic metabolism as a function of spring temperature, pH, and total sulfide. GAMs comprised of temperature explained 38.8% of the variation in the distribution of phototrophic metabolism, whereas GAMs comprised of sulfide and pH explained 19.6 and 11.2% of the variation, respectively. These results suggest that of the measured variables, temperature is the primary constraint on the distribution of phototrophs in YNP. GAMs comprised of multiple variables explained a larger percentage of the variation in the distribution of phototrophic metabolism, indicating additive interactions among variables. A GAM that combined temperature and sulfide explained the greatest variation in the dataset (53.4%) while minimizing the introduction of degrees of freedom. In an effort to verify the extent to which phototroph distribution reflects constraints on activity, we examined the influence of sulfide and temperature on dissolved inorganic carbon (DIC) uptake rates under both light and dark conditions. Light-driven DIC uptake decreased systematically with increasing concentrations of sulfide in acidic, algal-dominated systems, but was unaffected in alkaline, cyanobacterial-dominated systems. In both alkaline and acidic systems, light-driven DIC uptake was suppressed in cultures incubated at temperatures 10°C greater than their in situ temperature. Collectively, these quantitative results indicate that apart from light availability, the habitat range of phototrophs in YNP springs is defined largely by constraints imposed firstly by temperature and secondly by sulfide on the activity of these populations that inhabit the edges of the habitat range. These findings are consistent with the predictions from GAMs and provide a quantitative framework from which to translate distributional patterns into fitness landscapes for use in interpreting the environmental constraints that have shaped the evolution of this process through Earth history.

摘要

基于怀俄明州黄石国家公园(YNP)地热泉中的439次观测数据,对地球化学变化影响光养代谢分布的程度进行了建模。构建了广义相加模型(GAM)来预测光养代谢的分布,该分布是泉水温度、pH值和总硫化物的函数。由温度构成的GAM解释了光养代谢分布变化的38.8%,而由硫化物和pH值构成的GAM分别解释了19.6%和11.2%的变化。这些结果表明,在所测量的变量中,温度是YNP中光养生物分布的主要限制因素。由多个变量构成的GAM解释了光养代谢分布变化的更大比例,表明变量之间存在相加相互作用。一个结合了温度和硫化物的GAM解释了数据集中最大的变化(53.4%),同时将自由度的引入降至最低。为了验证光养生物分布反映活动限制的程度,我们研究了硫化物和温度在光照和黑暗条件下对溶解无机碳(DIC)吸收速率的影响。在酸性、以藻类为主导的系统中,光驱动的DIC吸收随着硫化物浓度的增加而系统性降低,但在碱性、以蓝细菌为主导的系统中不受影响。在碱性和酸性系统中,在比原位温度高10°C的温度下培养的培养物中,光驱动的DIC吸收均受到抑制。总体而言,这些定量结果表明,除了光照可用性外,YNP温泉中光养生物的栖息地范围主要由温度首先施加的限制和其次由硫化物对栖息在栖息地范围边缘的这些种群活动的限制所定义。这些发现与GAM的预测一致,并提供了一个定量框架,据此可将分布模式转化为适合度景观,用于解释在地球历史进程中塑造这一过程演化的环境限制因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ce9/3376417/3ecdbecbab68/fmicb-03-00221-g001.jpg

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