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真核 DNA 聚合酶对 2,6-二氨基-4-羟基-N(5)-(甲基)-甲酰胺基嘧啶(MeFapy-dGuo)加合物的复制。

Replication of the 2,6-diamino-4-hydroxy-N(5)-(methyl)-formamidopyrimidine (MeFapy-dGuo) adduct by eukaryotic DNA polymerases.

机构信息

Departments of Chemistry and Biochemistry, Vanderbilt-Ingram Cancer Center and Center in Molecular Toxicology, Vanderbilt University, Nashville, TN 37235, USA.

出版信息

Chem Res Toxicol. 2012 Aug 20;25(8):1652-61. doi: 10.1021/tx300113e. Epub 2012 Jul 6.

Abstract

N(6)-(2-Deoxy-d-erythro-pentofuranosyl)-2,6-diamino-3,4-dihydro-4-oxo-5-N-methylformamidopyrimidine (MeFapy-dGuo) has been identified as a stable DNA adduct that arises from the reaction of DNA with a variety of methylating agents. Since this lesion persists in DNA and may contribute to the overall mutagenesis from electrophilic methylating agents, the MeFapy-dGuo lesion was incorporated into oligonucleotides, and its replication bypass was examined in vitro with a panel of eukaryotic high fidelity (hPols α, β, and δ/PCNA) and translesion (hPols η, κ, ι, Rev1, ν, and yPol ζ) polymerases to address its miscoding potential. The MeFapy-dGuo was found to be a strong block to the high fidelity polymerases at either the insertion or the extension step. Efficient translesion synthesis was observed for hPols η and κ, and the combined activities of hRev1 and yPol ζ. The nucleotide sequences of the extension products were determined by mass spectrometry. The error-free extension product was the most abundant product observed for each polymerase. Misreplication products, which included misinsertion of Thy, Gua, and Ade opposite the MeFapy-dGuo lesion, as well as an interesting one-nucleotide deletion product, were observed when hPols η and κ were employed; these events accounted for 8-29% of the total extension products observed. The distribution and abundance of the misreplication products were dependent on the polymerases and local sequence context of the lesion. Collectively, these data suggest that although MeFapy-dGuo adducts represent a relatively minor proportion of the total alkylated lesions, their miscoding potentials could significantly contribute to genomic instability.

摘要

N(6)-(2-脱氧-d-赤式-戊呋喃糖基)-2,6-二氨基-3,4-二氢-4-氧代-5-N-甲酰胺基嘧啶(MeFapy-dGuo)已被确定为一种稳定的 DNA 加合物,它是由 DNA 与各种甲基化剂反应产生的。由于这种损伤在 DNA 中持续存在,并可能导致亲电甲基化剂引起的总体突变,因此将 MeFapy-dGuo 损伤掺入寡核苷酸中,并使用一组真核高保真(hPols α、β 和 δ/PCNA)和跨损伤(hPols η、κ、ι、Rev1、ν 和 yPol ζ)聚合酶在体外检查其复制旁路,以解决其错配编码潜力。发现 MeFapy-dGuo 在插入或延伸步骤都强烈阻止高保真聚合酶。hPols η 和 κ 以及 hRev1 和 yPol ζ 的组合活性观察到有效的跨损伤合成。通过质谱法确定延伸产物的核苷酸序列。对于每个聚合酶,无错误延伸产物是观察到的最丰富产物。当使用 hPols η 和 κ 时,观察到包括在 MeFapy-dGuo 损伤处错配插入 Thy、Gua 和 Ade 以及一个有趣的一个核苷酸缺失产物在内的错配复制产物;这些事件占观察到的总延伸产物的 8-29%。错配复制产物的分布和丰度取决于聚合酶和损伤的局部序列上下文。总的来说,这些数据表明,尽管 MeFapy-dGuo 加合物代表总烷基化损伤的相对较小比例,但它们的错配编码潜力可能会显著导致基因组不稳定。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3cf1/3682502/e8343cd88c32/nihms473086f1.jpg

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