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卷柏属端粒:古老的陆生植物谱系中的保守和独特特征。

Selaginella moellendorffii telomeres: conserved and unique features in an ancient land plant lineage.

机构信息

Department of Biology, Texas A&M University, College Station , TX, USA.

出版信息

Front Plant Sci. 2012 Jul 19;3:161. doi: 10.3389/fpls.2012.00161. eCollection 2012.

DOI:10.3389/fpls.2012.00161
PMID:22833748
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3400083/
Abstract

Telomeres, the essential terminal regions of linear eukaryotic chromosomes, consist of G-rich DNA repeats bound by a plethora of associated proteins. While the general pathways of telomere maintenance are evolutionarily conserved, individual telomere complex components show remarkable variation between eukaryotic lineages and even within closely related species. The recent genome sequencing of the lycophyte Selaginella moellendorffii and the availability of an ever-increasing number of flowering plant genomes provides a unique opportunity to evaluate the molecular and functional evolution of telomere components from the early evolving non-seed plants to the more developmentally advanced angiosperms. Here we analyzed telomere sequence in S. moellendorffii and found it to consist of TTTAGGG repeats, typical of most plants. Telomere tracts in S. moellendorffii range from 1 to 5.5 kb, closely resembling Arabidopsis thaliana. We identified several S. moellendorffii genes encoding sequence homologs of proteins involved in telomere maintenance in other organisms, including CST complex components and the telomere-binding proteins, POT1 and the TRFL family. Notable sequence similarities and differences were uncovered among the telomere-related genes in some of the plant lineages. Taken together, the data indicate that comparative analysis of the telomere complex in early diverging land plants such as S. moellendorffii and green algae will yield important insights into the evolution of telomeres and their protein constituents.

摘要

端粒是线性真核染色体的必需末端区域,由富含 G 的 DNA 重复序列组成,并与大量相关蛋白结合。虽然端粒维持的一般途径在进化上是保守的,但个别端粒复合物成分在真核生物谱系之间甚至在密切相关的物种中表现出显著的差异。石松目的木贼属和越来越多的开花植物基因组的最近全基因组测序为评估端粒成分从早期进化的非种子植物到更具发育优势的被子植物的分子和功能进化提供了独特的机会。在这里,我们分析了木贼属中的端粒序列,发现它由 TTTAGGG 重复序列组成,这是大多数植物的典型特征。木贼属中的端粒片段长度为 1 到 5.5 kb,与拟南芥非常相似。我们鉴定了几个木贼属基因,这些基因编码在其他生物体中参与端粒维持的蛋白质的序列同源物,包括 CST 复合物成分和端粒结合蛋白 POT1 和 TRFL 家族。在一些植物谱系中,端粒相关基因之间发现了显著的序列相似性和差异。总之,这些数据表明,对早期分化的陆地植物(如木贼属和绿藻)中端粒复合物的比较分析将为端粒及其蛋白质成分的进化提供重要的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f03/3400083/2ee8840862e6/fpls-03-00161-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f03/3400083/fa10d183dc21/fpls-03-00161-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f03/3400083/3adcc4da1835/fpls-03-00161-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f03/3400083/2ee8840862e6/fpls-03-00161-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f03/3400083/fa10d183dc21/fpls-03-00161-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f03/3400083/3adcc4da1835/fpls-03-00161-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f03/3400083/2ee8840862e6/fpls-03-00161-g003.jpg

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本文引用的文献

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The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.卷柏基因组鉴定出与维管植物进化相关的遗传变化。
Science. 2011 May 20;332(6032):960-3. doi: 10.1126/science.1203810. Epub 2011 May 5.
2
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.MEGA5:用于最大似然法、进化距离法和最大简约法的分子进化遗传学分析。
Mol Biol Evol. 2011 Oct;28(10):2731-9. doi: 10.1093/molbev/msr121. Epub 2011 May 4.
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Telomeric and extra-telomeric roles for telomerase and the telomere-binding proteins.
Nat Plants. 2021 May;7(5):554-565. doi: 10.1038/s41477-021-00888-z. Epub 2021 Apr 5.
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Potential Risks in the Paradigm of Basic to Translational Research: A Critical Evaluation of qPCR Telomere Size Techniques.从基础研究到转化研究模式中的潜在风险:对qPCR端粒大小技术的批判性评估
J Cancer Epidemiol Treat. 2015;1(1):28-37. doi: 10.24218/jcet.2015.08. Epub 2015 Aug 12.
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Evolution of the Telomere-Associated Protein POT1a in Arabidopsis thaliana Is Characterized by Positive Selection to Reinforce Protein-Protein Interaction.拟南芥端粒相关蛋白POT1a的进化具有正选择特征,以加强蛋白质-蛋白质相互作用。
Mol Biol Evol. 2015 May;32(5):1329-41. doi: 10.1093/molbev/msv025. Epub 2015 Feb 19.
6
Extending the model of Arabidopsis telomere length and composition across Brassicaceae.将拟南芥端粒长度和组成模型扩展至十字花科植物。
Chromosome Res. 2014 Jun;22(2):153-66. doi: 10.1007/s10577-014-9423-y.
7
Phosphoproteomic analysis of the non-seed vascular plant model Selaginella moellendorffii.拟南芥非种子维管束模式植物石松的磷酸化蛋白质组分析。
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8
Application of the ITS2 Region for Barcoding Medicinal Plants of Selaginellaceae in Pteridophyta.ITS2 区域在蕨类植物卷柏科药用植物条形码鉴定中的应用
PLoS One. 2013 Jun 27;8(6):e67818. doi: 10.1371/journal.pone.0067818. Print 2013.
端粒酶和端粒结合蛋白的端粒和端粒外作用。
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