嗜热纤维素分解古菌“Thermogladius cellulolyticus”1633 的全基因组序列
Complete genome sequence of the hyperthermophilic cellulolytic crenarchaeon "Thermogladius cellulolyticus" 1633.
机构信息
Centre Bioengineering, Russian Academy of Sciences, Moscow, Russia.
出版信息
J Bacteriol. 2012 Aug;194(16):4446-7. doi: 10.1128/JB.00894-12.
Abstract
Strain 1633, a novel member of the genus Thermogladius, isolated from a freshwater hot spring, is an anaerobic hyperthermophilic crenarchaeon capable of fermenting proteinaceous and cellulose substrates. The complete genome sequence reveals genes for protein and carbohydrate-active enzymes, the Embden-Meyerhof pathway for glucose metabolism, cytoplasmic NADP-dependent hydrogenase, and several energy-coupling membrane-bound oxidoreductases.
摘要
菌株 1633 是从一个淡水温泉中分离出来的新型 Thermogladius 属成员，是一种厌氧嗜热古菌，能够发酵蛋白质和纤维素底物。完整的基因组序列揭示了用于蛋白质和碳水化合物活性酶、葡萄糖代谢的 EMP 途径、细胞质 NADP 依赖性氢化酶以及几种能量偶联膜结合氧化还原酶的基因。
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2
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3
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J Bacteriol. 2009 Apr;191(7):2371-9. doi: 10.1128/JB.01525-08. Epub 2008 Dec 29.
4
Occurrence, classification, and biological function of hydrogenases: an overview.
Chem Rev. 2007 Oct;107(10):4206-72. doi: 10.1021/cr050196r.
5
AutoFACT: an automatic functional annotation and classification tool.
BMC Bioinformatics. 2005 Jun 16;6:151. doi: 10.1186/1471-2105-6-151.
6
The unique features of glycolytic pathways in Archaea.
Biochem J. 2003 Oct 15;375(Pt 2):231-46. doi: 10.1042/BJ20021472.
7
A simple energy-conserving system: proton reduction coupled to proton translocation.
Proc Natl Acad Sci U S A. 2003 Jun 24;100(13):7545-50. doi: 10.1073/pnas.1331436100. Epub 2003 Jun 5.
8
Improved microbial gene identification with GLIMMER.
Nucleic Acids Res. 1999 Dec 1;27(23):4636-41. doi: 10.1093/nar/27.23.4636.
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