CRA-Cereal Research Centre, SS16 km 675, 71122 Foggia, Italy.
Theor Appl Genet. 2012 Dec;125(8):1619-38. doi: 10.1007/s00122-012-1939-y. Epub 2012 Aug 8.
A durum wheat consensus linkage map was developed by combining segregation data from six mapping populations. All of the crosses were derived from durum wheat cultivars, except for one accession of T. ssp. dicoccoides. The consensus map was composed of 1,898 loci arranged into 27 linkage groups covering all 14 chromosomes. The length of the integrated map and the average marker distance were 3,058.6 and 1.6 cM, respectively. The order of the loci was generally in agreement with respect to the individual maps and with previously published maps. When the consensus map was aligned to the deletion bin map, 493 markers were assigned to specific bins. Segregation distortion was found across many durum wheat chromosomes, with a higher frequency for the B genome. This high-density consensus map allowed the scanning of the genome for chromosomal rearrangements occurring during the wheat evolution. Translocations and inversions that were already known in literature were confirmed, and new putative rearrangements are proposed. The consensus map herein described provides a more complete coverage of the durum wheat genome compared with previously developed maps. It also represents a step forward in durum wheat genomics and an essential tool for further research and studies on evolution of the wheat genome.
通过整合来自六个作图群体的分离数据,开发了一份普通小麦共识连锁图谱。除了一个硬粒小麦栽培品种的一个品系外,所有的杂交均来自硬粒小麦品种。该共识图谱由 1898 个位点组成,排列成 27 个连锁群,覆盖了所有 14 条染色体。整合图谱的长度和平均标记间距离分别为 3058.6 和 1.6cM。这些位点的顺序通常与个别图谱以及先前发表的图谱一致。当将共识图谱与缺失 bin 图谱进行比对时,493 个标记被分配到特定的 bin 中。在许多硬粒小麦染色体上发现了分离失真,B 基因组的频率更高。该高密度共识图谱允许在基因组中扫描在小麦进化过程中发生的染色体重排。已在文献中报道的易位和倒位得到了确认,并提出了新的假定重排。与以前开发的图谱相比,本文所描述的共识图谱提供了对硬粒小麦基因组更完整的覆盖。它也代表了硬粒小麦基因组学的一个进步,是进一步研究和研究小麦基因组进化的重要工具。