Institute of Life Sciences, Jiangsu University, Zhenjiang, Jiangsu 212013, China.
Infect Genet Evol. 2012 Dec;12(8):1944-8. doi: 10.1016/j.meegid.2012.08.001. Epub 2012 Aug 11.
China-Myanmar border plays a crucial role in HIV-1 transmission in Asia. Here, we performed Bayesian phylodynamics analyses on p17 gene using BEAST to investigate HIV-1 transmission in this region. Maximum clade credibility trees of subtype C and CRF01_AE show that majority of unique recombinant forms (URFs) and pure subtype strains from Dehong and Myanmar cluster together, forming large clades with ancestral geographical states of Dehong. Bayes factor tests support the statistically significant geographic diffusion link between Dehong and Myanmar. The estimated time to the most recent common ancestor of Myanmar URFs_BC (1999.2) was later than that of Dehong URFs_BC (1998.0), but earlier than that of Myanmar URFs_01BC (2004.3). Since 1998, HIV-1 recombination between subtypes B, C and CRF01_AE has been continuously occurring in China-Myanmar border region. These results suggest that HIV-1 subtypes B, C and CRF01_AE were most likely transmitted from Dehong to Myanmar, and predict that URFs_01BC should be also prevalent in Dehong, Yunnan.
中缅边境在亚洲的 HIV-1 传播中起着至关重要的作用。在这里,我们使用 BEAST 对 p17 基因进行贝叶斯系统发育分析,以调查该地区的 HIV-1 传播。C 亚型和 CRF01_AE 的最大分支可信度树表明,来自德宏和缅甸的大多数独特重组形式(URF)和纯亚型毒株聚集在一起,形成具有德宏原始地理状态的大分支。贝叶斯因子检验支持德宏与缅甸之间存在具有统计学意义的地理扩散联系。缅甸 URFs_BC(1999.2)的最近共同祖先的估计时间晚于德宏 URFs_BC(1998.0),但早于缅甸 URFs_01BC(2004.3)。自 1998 年以来,中缅边境地区 B、C 和 CRF01_AE 亚型之间的 HIV-1 重组一直在持续发生。这些结果表明,B、C 和 CRF01_AE 亚型 HIV-1 很可能是从德宏传播到缅甸的,并预测 URFs_01BC 也应该在云南德宏流行。