Department of Physics, University of Palermo, Via Archirafi 36, I-90123 Palermo, Italy.
Proc Natl Acad Sci U S A. 2012 Sep 11;109(37):14894-9. doi: 10.1073/pnas.1205809109. Epub 2012 Aug 27.
The acknowledged success of the Monod-Wyman-Changeux (MWC) allosteric model stems from its efficacy in accounting for the functional behavior of many complex proteins starting with hemoglobin (the paradigmatic case) and extending to channels and receptors. The kinetic aspects of the allosteric model, however, have been often neglected, with the exception of hemoglobin and a few other proteins where conformational relaxations can be triggered by a short and intense laser pulse, and monitored by time-resolved optical spectroscopy. Only recently the application of time-resolved wide-angle X-ray scattering (TR-WAXS), a direct structurally sensitive technique, unveiled the time scale of hemoglobin quaternary structural transition. In order to test the generality of the MWC kinetic model, we carried out a TR-WAXS investigation in parallel on adult human hemoglobin and on a recombinant protein (HbYQ) carrying two mutations at the active site [Leu(B10)Tyr and His(E7)Gln]. HbYQ seemed an ideal test because, although exhibiting allosteric properties, its kinetic and structural properties are different from adult human hemoglobin. The structural dynamics of HbYQ unveiled by TR-WAXS can be quantitatively accounted for by the MWC kinetic model. Interestingly, the main structural change associated with the R-T allosteric transition (i.e., the relative rotation and translation of the dimers) is approximately 10-fold slower in HbYQ, and the drop in the allosteric transition rate with ligand saturation is steeper. Our results extend the general validity of the MWC kinetic model and reveal peculiar thermodynamic properties of HbYQ. A possible structural interpretation of the characteristic kinetic behavior of HbYQ is also discussed.
MWC 变构模型的公认成功源于其能够解释许多复杂蛋白质的功能行为,从血红蛋白(典范案例)扩展到通道和受体。然而,除了血红蛋白和少数其他蛋白质外,变构模型的动力学方面经常被忽视,在这些蛋白质中,短而强烈的激光脉冲可以触发构象松弛,并通过时间分辨光学光谱进行监测。直到最近,时间分辨广角 X 射线散射(TR-WAXS)的应用——一种直接的结构敏感技术,揭示了血红蛋白四级结构转变的时间尺度。为了检验 MWC 动力学模型的通用性,我们在成人血红蛋白和在活性部位带有两个突变的重组蛋白(HbYQ)上同时进行了 TR-WAXS 研究[Leu(B10)Tyr 和 His(E7)Gln]。HbYQ 似乎是一个理想的测试对象,因为尽管它具有变构性质,但它的动力学和结构性质与成人血红蛋白不同。TR-WAXS 揭示的 HbYQ 的结构动力学可以用 MWC 动力学模型进行定量解释。有趣的是,与 R-T 变构跃迁相关的主要结构变化(即二聚体的相对旋转和平移)在 HbYQ 中大约慢 10 倍,并且配体饱和时变构跃迁速率的下降更为陡峭。我们的结果扩展了 MWC 动力学模型的普遍有效性,并揭示了 HbYQ 的特殊热力学性质。还讨论了 HbYQ 特征动力学行为的可能结构解释。