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米曲霉3.042菌株的基因组序列草图

Draft genome sequence of Aspergillus oryzae strain 3.042.

作者信息

Zhao Guozhong, Yao Yunping, Qi Wei, Wang Chunling, Hou Lihua, Zeng Bin, Cao Xiaohong

机构信息

Key Laboratory of Food Nutrition and Safety, Tianjin University of Science and Technology, Ministry of Education, Tianjin, China.

出版信息

Eukaryot Cell. 2012 Sep;11(9):1178. doi: 10.1128/EC.00160-12.

DOI:10.1128/EC.00160-12
PMID:22933657
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3445974/
Abstract

Aspergillus oryzae is the most important fungus for the traditional fermentation in China and is particularly important in soy sauce fermentation. We report the 36,547,279-bp draft genome sequence of A. oryzae 3.042 and compared it to the published genome sequence of A. oryzae RIB40.

摘要

米曲霉是中国传统发酵中最重要的真菌,在酱油发酵中尤为重要。我们报道了米曲霉3.042的36,547,279碱基对草图基因组序列,并将其与已发表的米曲霉RIB40基因组序列进行了比较。

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本文引用的文献

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A further study on chromosome minimization by protoplast fusion in Aspergillus oryzae.进一步研究通过原生质体融合在米曲霉中进行染色体最小化。
Mol Genet Genomics. 2012 Feb;287(2):177-87. doi: 10.1007/s00438-011-0669-1. Epub 2011 Dec 30.
2
SclR, a basic helix-loop-helix transcription factor, regulates hyphal morphology and promotes sclerotial formation in Aspergillus oryzae.SclR是一种碱性螺旋-环-螺旋转录因子,可调节米曲霉的菌丝形态并促进菌核形成。
Eukaryot Cell. 2011 Jul;10(7):945-55. doi: 10.1128/EC.00013-11. Epub 2011 May 6.
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De novo assembly of human genomes with massively parallel short read sequencing.利用大规模平行短读测序进行人类基因组从头组装。
Genome Res. 2010 Feb;20(2):265-72. doi: 10.1101/gr.097261.109. Epub 2009 Dec 17.
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Convergent evolution and orphan genes in the Fur4p-like family and characterization of a general nucleoside transporter in Aspergillus nidulans.构巢曲霉中Fur4p样家族的趋同进化与孤儿基因及一种通用核苷转运体的特性分析
Mol Microbiol. 2009 Jul;73(1):43-57. doi: 10.1111/j.1365-2958.2009.06738.x. Epub 2009 May 18.
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Genome sequencing and analysis of Aspergillus oryzae.米曲霉的基因组测序与分析
Nature. 2005 Dec 22;438(7071):1157-61. doi: 10.1038/nature04300.