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染色质的守门员:小分子代谢物引发基因表达的巨大变化。

Gatekeepers of chromatin: Small metabolites elicit big changes in gene expression.

机构信息

Department of Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd., Dallas, TX 75390-9038, USA.

出版信息

Trends Biochem Sci. 2012 Nov;37(11):477-83. doi: 10.1016/j.tibs.2012.07.008. Epub 2012 Sep 1.

DOI:10.1016/j.tibs.2012.07.008
PMID:22944281
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3482309/
Abstract

Eukaryotes are constantly fine-tuning their gene expression programs in response to the demands of the environment and the availability of nutrients. Such dynamic regulation of the genome necessitates versatile chromatin architecture. Rapid changes in transcript levels are brought about via a wide range of post-translational modifications of the histone proteins that control chromatin structure. Many enzymes responsible for these modifications have been identified and they require various metabolic cofactors or substrates for their activity. Herein, we highlight recent developments that have begun to reveal particular cellular metabolites that might in fact be underappreciated regulators of gene expression through their ability to modulate particular histone modifications.

摘要

真核生物不断地根据环境需求和营养物质的可利用性来精细调控其基因表达程序。基因组的这种动态调控需要多功能的染色质结构。通过控制染色质结构的组蛋白蛋白的广泛翻译后修饰,可以实现转录水平的快速变化。许多负责这些修饰的酶已经被鉴定出来,它们的活性需要各种代谢辅助因子或底物。在此,我们强调了最近的一些发展,这些发展开始揭示特定的细胞代谢物,这些代谢物实际上可能通过调节特定的组蛋白修饰而成为被低估的基因表达调节剂。

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Gatekeepers of chromatin: Small metabolites elicit big changes in gene expression.染色质的守门员:小分子代谢物引发基因表达的巨大变化。
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本文引用的文献

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Bittersweet memories: linking metabolism to epigenetics through O-GlcNAcylation.苦乐参半的回忆:通过 O-GlcNAc ylation 将代谢与表观遗传学联系起来。
Nat Rev Mol Cell Biol. 2012 Apr 23;13(5):312-21. doi: 10.1038/nrm3334.
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Histone recognition and large-scale structural analysis of the human bromodomain family.人类溴结构域家族的组蛋白识别和大规模结构分析。
Cell. 2012 Mar 30;149(1):214-31. doi: 10.1016/j.cell.2012.02.013.
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FAD-dependent lysine-specific demethylase-1 regulates cellular energy expenditure.FAD 依赖性赖氨酸特异性去甲基酶-1 调节细胞能量消耗。
Nat Commun. 2012 Mar 27;3:758. doi: 10.1038/ncomms1755.
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A two-way street: reciprocal regulation of metabolism and signalling.双向通路:代谢与信号的相互调节。
Nat Rev Mol Cell Biol. 2012 Mar 7;13(4):270-6. doi: 10.1038/nrm3305.
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IDH mutation impairs histone demethylation and results in a block to cell differentiation.IDH 突变会损害组蛋白去甲基化,导致细胞分化受阻。
Nature. 2012 Feb 15;483(7390):474-8. doi: 10.1038/nature10860.
6
On acetyl-CoA as a gauge of cellular metabolic state.论以乙酰辅酶A作为细胞代谢状态的指标。
Cold Spring Harb Symp Quant Biol. 2011;76:195-202. doi: 10.1101/sqb.2011.76.010769. Epub 2011 Sep 6.
7
Acetyl-CoA induces cell growth and proliferation by promoting the acetylation of histones at growth genes.乙酰辅酶 A 通过促进生长基因组蛋白的乙酰化来诱导细胞生长和增殖。
Mol Cell. 2011 May 20;42(4):426-37. doi: 10.1016/j.molcel.2011.05.004.
8
The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases.致癌代谢物 2-羟戊二酸抑制组蛋白赖氨酸去甲基酶。
EMBO Rep. 2011 May;12(5):463-9. doi: 10.1038/embor.2011.43. Epub 2011 Apr 1.
9
Methionine adenosyltransferase II serves as a transcriptional corepressor of Maf oncoprotein.蛋氨酸腺苷转移酶 II 作为 Maf 癌蛋白的转录核心抑制因子。
Mol Cell. 2011 Mar 4;41(5):554-66. doi: 10.1016/j.molcel.2011.02.018.
10
KAT(ching) metabolism by the tail: insight into the links between lysine acetyltransferases and metabolism.尾部的 KAT(ching)代谢:赖氨酸乙酰转移酶与代谢之间联系的深入了解。
Chembiochem. 2011 Jan 24;12(2):290-8. doi: 10.1002/cbic.201000438. Epub 2010 Nov 24.