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通过常压扫描电子显微镜直接观察结晶缓冲液中的蛋白质微晶。

Direct observation of protein microcrystals in crystallization buffer by atmospheric scanning electron microscopy.

作者信息

Maruyama Yuusuke, Ebihara Tatsuhiko, Nishiyama Hidetoshi, Konyuba Yuji, Senda Miki, Numaga-Tomita Takuro, Senda Toshiya, Suga Mitsuo, Sato Chikara

机构信息

Biomedical Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Higashi 1-1-1, Tsukuba, Ibaraki 305-8566, Japan.

Advanced Technology Division, JEOL Ltd., Akishima, Tokyo 196-8558, Japan.

出版信息

Int J Mol Sci. 2012;13(8):10553-10567. doi: 10.3390/ijms130810553. Epub 2012 Aug 22.

DOI:10.3390/ijms130810553
PMID:22949879
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3431877/
Abstract

X-ray crystallography requires high quality crystals above a given size. This requirement not only limits the proteins to be analyzed, but also reduces the speed of the structure determination. Indeed, the tertiary structures of many physiologically important proteins remain elusive because of the so-called "crystallization bottleneck". Once microcrystals have been obtained, crystallization conditions can be optimized to produce bigger and better crystals. However, the identification of microcrystals can be difficult due to the resolution limit of optical microscopy. Electron microscopy has sometimes been utilized instead, with the disadvantage that the microcrystals usually must be observed in vacuum, which precludes the usage for crystal screening. The atmospheric scanning electron microscope (ASEM) allows samples to be observed in solution. Here, we report the use of this instrument in combination with a special thin-membrane dish with a crystallization well. It was possible to observe protein crystals of lysozyme, lipase B and a histone chaperone TAF-Iβ in crystallization buffers, without the use of staining procedures. The smallest crystals observed with ASEM were a few μm in width, and ASEM can be used with non-transparent solutions. Furthermore, the growth of salt crystals could be monitored in the ASEM, and the difference in contrast between salt and protein crystals made it easy to distinguish between these two types of microcrystals. These results indicate that the ASEM could be an important new tool for the screening of protein microcrystals.

摘要

X射线晶体学需要高质量且大于给定尺寸的晶体。这一要求不仅限制了可供分析的蛋白质,还降低了结构测定的速度。事实上,由于所谓的“结晶瓶颈”,许多具有重要生理功能的蛋白质的三级结构仍然难以确定。一旦获得微晶,就可以优化结晶条件以生成更大、更好的晶体。然而,由于光学显微镜的分辨率限制,微晶的识别可能会很困难。有时会转而使用电子显微镜,但缺点是微晶通常必须在真空中观察,这排除了其用于晶体筛选的可能性。常压扫描电子显微镜(ASEM)允许在溶液中观察样品。在此,我们报告了将该仪器与带有结晶孔的特殊薄膜培养皿结合使用的情况。在不使用染色程序的情况下,有可能在结晶缓冲液中观察到溶菌酶、脂肪酶B和组蛋白伴侣TAF-Iβ的蛋白质晶体。用ASEM观察到的最小晶体宽度为几微米,并且ASEM可用于不透明溶液。此外,在ASEM中可以监测盐晶体的生长,盐晶体和蛋白质晶体之间的对比度差异使得很容易区分这两种微晶。这些结果表明,ASEM可能成为筛选蛋白质微晶的一种重要新工具。

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