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真空紫外电子圆二色性研究在水溶液中通过时间依赖密度泛函理论的甲基 -α-D-吡喃葡萄糖苷。

Vacuum-ultraviolet electronic circular dichroism study of methyl α-D-glucopyranoside in aqueous solution by time-dependent density functional theory.

机构信息

Hiroshima Synchrotron Radiation Center, Hiroshima University, Higashi-Hiroshima 739-0046, Japan.

出版信息

J Phys Chem A. 2012 Oct 11;116(40):9996-10003. doi: 10.1021/jp306914s. Epub 2012 Sep 27.

DOI:10.1021/jp306914s
PMID:22950837
Abstract

The vacuum-ultraviolet (VUV) electronic circular dichroism (ECD) spectrum of methyl α-D-glucopyranoside (methyl α-D-Glc) was measured down to 163 nm in aqueous solution using a synchrotron-radiation VUV-ECD spectrophotometer. The spectrum exhibited two characteristic ECD peaks around 170 nm, which depend on the trans (T) and gauche (G) configurations of the hydroxymethyl group at C-5. To elucidate the influences of the T and G configurations on the spectrum, the ECD spectra of three rotamers (α-GT, α-GG, and α-TG) of methyl α-D-Glc were calculated using time-dependent density functional theory (TDDFT) combined with molecular dynamics simulation. A linear combination of the ECD spectra of these three rotamers, which differ markedly from each other, produced a methyl α-D-Glc spectrum similar to that observed experimentally. The spectrum was assignable to the n-σ* transitions of the ring oxygen and methoxy oxygen with minor contributions from the hydroxyl oxygen. The differences in α-GT, α-GG, and α-TG spectra were attributed to fluctuations of the configurations of the hydroxymethyl group at C-5 and the hydroxyl group at C-4, which strongly affected the orientations of intramolecular hydrogen bonds around the ring oxygen. These findings demonstrate that combining VUV-ECD and TDDFT is useful for structural characterization of saccharides in aqueous solution.

摘要

采用同步辐射真空紫外圆二色光谱仪在水溶液中测量了甲基-α-D-吡喃葡萄糖苷(甲基-α-D-Glc)的真空紫外(VUV)电子圆二色光谱,其测量下限可达 163nm。该光谱在 170nm 左右显示出两个特征的 ECD 峰,这取决于 C-5 位羟甲基的反式(T)和 gauche(G)构象。为了阐明 T 和 G 构象对光谱的影响,使用含时密度泛函理论(TDDFT)结合分子动力学模拟计算了甲基-α-D-Glc 的三种旋光异构体(α-GT、α-GG 和 α-TG)的 ECD 光谱。这三种旋光异构体的 ECD 光谱的线性组合与实验观察到的光谱非常相似,而这三种旋光异构体的 ECD 光谱彼此之间存在明显差异。该光谱可归因于环氧和甲氧基的 n-σ*跃迁,羟基氧也有少量贡献。α-GT、α-GG 和 α-TG 光谱的差异归因于 C-5 位羟甲基和 C-4 位羟基的构象波动,这强烈影响了环氧周围分子内氢键的取向。这些发现表明,将 VUV-ECD 和 TDDFT 相结合,可用于研究水溶液中糖的结构特征。

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