University of California Davis and Center for Population Biology, 2320 Storer Hall, One Shields Avenue, Davis, CA 95616, USA.
Ann Bot. 2012 Nov;110(6):1195-203. doi: 10.1093/aob/mcs187. Epub 2012 Sep 7.
Genome duplication is a central process in plant evolution and contributes to patterns of variation in genome size within and among lineages. Studies that combine cytogeography with genome size measurements contribute to our basic knowledge of cytotype distributions and their associations with variation in genome size.
Ploidy and genome size were assessed with direct chromosome counts and flow cytometry for 78 populations within the Claytonia perfoliata complex, comprised of three diploid taxa with numerous polyploids that range to the decaploid level. The relationship between genome size and temperature and precipitation was investigated within and across cytotypes to test for associations between environmental factors and nuclear DNA content.
A euploid series (n = 6) of diploids to octoploids was documented through chromosome counts, and decaploids were suggested by flow cytometry. Increased variation in genome size among populations was found at higher ploidy levels, potentially associated with differential contributions of diploid parental genomes, variation in rates of genomic loss or gain, or undetected hybridization. Several accessions were detected with atypical genome sizes, including a diploid population of C. parviflora ssp. grandiflora with an 18 % smaller genome than typical, and hexaploids of C. perfoliata and C. parviflora with genomes 30 % larger than typical. There was a slight but significant association of larger genome sizes with colder winter temperature across the C. perfoliata complex as a whole, and a strong association between lower winter temperatures and large genome size for tetraploid C. parviflora.
The C. perfoliata complex is characterized by polyploids ranging from tetraploid to decaploid, with large magnitude variation in genome size at higher ploidy levels, associated in part with environmental variation in temperature.
基因组加倍是植物进化的核心过程,导致了谱系内和谱系间基因组大小的变异模式。将细胞遗传学与基因组大小测量相结合的研究有助于我们了解细胞型的分布及其与基因组大小变化的关联。
通过直接染色体计数和流式细胞术,对 Claytonia perfoliata 复合体的 78 个种群进行了倍性和基因组大小的评估,该复合体由三个二倍体类群组成,其中包含许多多倍体,最高可达十倍体水平。在细胞型内和跨细胞型调查了基因组大小与温度和降水的关系,以检验环境因素与核 DNA 含量之间的关联。
通过染色体计数记录了一个从二倍体到八倍体的整倍体系列(n = 6),并通过流式细胞术推测存在十倍体。在更高的倍性水平上,发现了种群间基因组大小的变异增加,这可能与二倍体亲本基因组的不同贡献、基因组丢失或获得的速率变化或未检测到的杂交有关。一些个体的基因组大小异常,包括一个比典型小 18%的二倍体 C. parviflora ssp. grandiflora 种群,以及比典型大 30%的 C. perfoliata 和 C. parviflora 的六倍体。整个 C. perfoliata 复合体中,较大的基因组大小与较冷的冬季温度之间存在微弱但显著的关联,而四倍体 C. parviflora 中冬季温度较低与较大的基因组大小之间存在强烈的关联。
C. perfoliata 复合体的特征是多倍体从四倍体到十倍体不等,在较高的倍性水平上基因组大小的变化幅度很大,部分与温度的环境变化有关。