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利用流式细胞术推断的毛连菜属(菊科)基因组大小变异及物种关系

Genome size variation and species relationships in Hieracium sub-genus Pilosella (Asteraceae) as inferred by flow cytometry.

作者信息

Suda Jan, Krahulcová Anna, Trávnícek Pavel, Rosenbaumová Radka, Peckert Tomás, Krahulec Frantisek

机构信息

Department of Botany, Faculty of Science, Charles University in Prague, Benátská 2, CZ-128 01 Prague, Czech Republic.

出版信息

Ann Bot. 2007 Dec;100(6):1323-35. doi: 10.1093/aob/mcm218. Epub 2007 Oct 7.

Abstract

BACKGROUND AND AIMS

Hieracium sub-genus Pilosella (hawkweeds) is a taxonomically complicated group of vascular plants, the structure of which is substantially influenced by frequent interspecific hybridization and polyploidization. Two kinds of species, 'basic' and 'intermediate' (i.e. hybridogenous), are usually recognized. In this study, genome size variation was investigated in a representative set of Central European hawkweeds in order to assess the value of such a data set for species delineation and inference of evolutionary relationships.

METHODS

Holoploid and monoploid genome sizes (C- and Cx-values) were determined using propidium iodide flow cytometry for 376 homogeneously cultivated individuals of Hieracium sub-genus Pilosella, including 24 species (271 individuals), five recent natural hybrids (seven individuals) and experimental F(1) hybrids from four parental combinations (98 individuals). Chromosome counts were available for more than half of the plant accessions. Base composition (proportion of AT/GC bases) was cytometrically estimated in 73 individuals.

KEY RESULTS

Seven different ploidy levels (2x-8x) were detected, with intraspecific ploidy polymorphism (up to four different cytotypes) occurring in 11 wild species. Mean 2C-values varied approx. 4.3-fold from 3.53 pg in diploid H. hoppeanum to 15.30 pg in octoploid H. brachiatum. 1Cx-values ranged from 1.72 pg in H. pilosella to 2.16 pg in H. echioides (1.26-fold). The DNA content of (high) polyploids was usually proportional to the DNA values of their diploid/low polyploid counterparts, indicating lack of processes altering genome size (i.e. genome down-sizing). Most species showed constant nuclear DNA amounts, exceptions being three hybridogenous taxa, in which introgressive hybridization was suggested as a presumable trigger for genome size variation. Monoploid genome sizes of hybridogenous species were always between the corresponding values of their putative parents. In addition, there was a good congruency between actual DNA estimates and theoretical values inferred from putative parental combinations and between DNA values of experimental F(1) hybrids and corresponding established hybridogenous taxa.

CONCLUSIONS

Significant differences in genome size between hawkweed species from hybridogenous lineages involving the small-genome H. pilosella document the usefulness of nuclear DNA content as a supportive marker for reliable delineation of several of the most problematic taxa in Hieracium sub-genus Pilosella (including classification of borderline morphotypes). In addition, genome size data were shown to have a good predictive value for inferring evolutionary relationships and genome constitution (i.e. putative parental combinations) in hybridogenous species.

摘要

背景与目的

毛连菜亚属(山柳菊属植物)是一类分类复杂的维管植物,其结构受到频繁的种间杂交和多倍体化的显著影响。通常可识别出两种类型的物种,即“基本型”和“中间型”(即杂交起源型)。在本研究中,对一组具有代表性的中欧山柳菊属植物的基因组大小变异进行了研究,以评估该数据集在物种划分和进化关系推断方面的价值。

方法

使用碘化丙啶流式细胞术测定了毛连菜亚属376个均匀栽培个体的全基因组和单倍体基因组大小(C值和Cx值),包括24个物种(271个个体)、5个近期自然杂交种(7个个体)以及来自4个亲本组合的实验F1杂交种(98个个体)。超过一半的植物材料有染色体计数数据。对73个个体进行了细胞光度法估计碱基组成(AT/GC碱基比例)。

主要结果

检测到7种不同的倍性水平(2x - 8x),11个野生种存在种内倍性多态性(多达4种不同的细胞型)。平均2C值变化约4.3倍,从二倍体的霍氏山柳菊的3.53 pg到八倍体的分枝山柳菊的15.30 pg。1Cx值范围从毛连菜的1.72 pg到猬菊叶山柳菊的2.16 pg(1.26倍)。(高)多倍体的DNA含量通常与其二倍体/低倍体对应物的DNA值成比例,表明不存在改变基因组大小的过程(即基因组缩小)。大多数物种的核DNA含量恒定,三个杂交起源类群除外,推测渐渗杂交是其基因组大小变异可能的触发因素。杂交起源物种的单倍体基因组大小总是介于其假定亲本的相应值之间。此外,实际DNA估计值与从假定亲本组合推断的理论值之间,以及实验F1杂交种的DNA值与相应已确定的杂交起源类群之间具有良好的一致性。

结论

涉及小基因组毛连菜的杂交起源谱系中山柳菊属物种间基因组大小存在显著差异,这证明了核DNA含量作为支持性标记对于可靠划分毛连菜亚属中一些最具问题的类群(包括边界形态类型的分类)的有用性。此外,基因组大小数据对于推断杂交起源物种的进化关系和基因组构成(即假定亲本组合)具有良好的预测价值。

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