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在大陆范围内,形成六个多倍体葱属(百合科)细胞型复杂基因组大小变化模式的适应和非适应机制的作用。

Role of adaptive and non-adaptive mechanisms forming complex patterns of genome size variation in six cytotypes of polyploid Allium oleraceum (Amaryllidaceae) on a continental scale.

机构信息

Plant Biosystematics and Ecology Research Group, Department of Botany, Faculty of Science, Palacký University, Šlechtitelů 11, CZ-783 71 Olomouc, Czech Republic.

出版信息

Ann Bot. 2013 Mar;111(3):419-31. doi: 10.1093/aob/mcs297. Epub 2013 Jan 24.

Abstract

BACKGROUND AND AIMS

Although the large variation in genome size among different species is widely acknowledged, the occurrence and extent of variation below the species level are still controversial and have not yet been satisfactorily analysed. The aim of this study was to assess genome size variation in six ploidy levels (2n = 3x-8x) of the polyploid Allium oleraceum over a large geographical gradient and to search for potential interpretations of the size variation.

METHODS

The genome sizes of 407 individuals of A. oleraceum collected from 114 populations across Europe were determined by flow cytometry using propidium iodide staining. The genome size variation was correlated with spatial, climatic and habitat variables.

KEY RESULTS

The mean holoploid genome size (2C DNA) was 42·49, 52·14, 63·34, 71·94, 85·51 and 92·12 pg at the tri-, tetra-, penta-, hexa-, hepta- and octoploid levels, respectively. Genome size varied from a minimum of 2·3 % in the octoploids to a maximum of 18·3 % in the tetraploids. Spatial structuring of genome size was observed within the tetra- and pentaploids, where 2C DNA significantly increased with both latitude and longitude, and correlated with several climatic variables, suggesting a gradient of continentality. Genome size in hexaploids showed low variation, weak correlation with climatic variables and no spatial structuring. Downsizing in monoploid genome size was observed between all cytotypes except for heptaploids. Splitting populations into western and eastern European groups resulted in strong differences in monoploid genome size between groups in tetra- and pentaploids but not in hexaploids. The monoploid genome sizes of the cytotypes were similar in the western group but diverged in the eastern group.

CONCLUSIONS

Complex patterns of holoploid and monoploid genome size variation found both within and between A. oleraceum cytotypes are most likely the result of several interacting factors, including different evolutionary origins of cytotypes via hybridization of parental combinations with different genome sizes in the south-western and south-eastern part of Europe, introgression between cytotypes, and antropic dispersal. The role of broad-scale and fine-scale environmental variables in shaping genome size is probably of minor importance in A. oleraceum.

摘要

背景与目的

尽管不同物种之间的基因组大小存在很大差异,但在物种以下水平上的变化发生和程度仍存在争议,尚未得到令人满意的分析。本研究的目的是评估多倍体葱属(Allium oleraceum)六个倍性水平(2n=3x-8x)在大地理梯度上的基因组大小变化,并寻找大小变化的潜在解释。

方法

使用碘化丙啶染色通过流式细胞术测定来自欧洲 114 个种群的 407 个葱属个体的基因组大小。将基因组大小的变化与空间、气候和生境变量相关联。

主要结果

三倍体、四倍体、五倍体、六倍体、七倍体和八倍体的全单倍体基因组大小(2C DNA)分别为 42.49、52.14、63.34、71.94、85.51 和 92.12 pg。基因组大小在八倍体中最小,为 2.3%,在四倍体中最大,为 18.3%。在四倍体和五倍体中观察到基因组大小的空间结构,其中 2C DNA 随纬度和经度显著增加,并与几个气候变量相关,表明大陆性梯度的存在。六倍体的基因组大小变化较小,与气候变量的相关性较弱,且没有空间结构。除七倍体外,所有倍性的单倍体基因组大小均呈缩小趋势。将种群分为西欧和东欧群体,导致四倍体和五倍体的群体中单倍体基因组大小存在显著差异,但在六倍体中则没有。在西欧群体中,各倍性的单倍体基因组大小相似,但在东欧群体中则存在差异。

结论

在葱属各倍性和单倍体基因组大小的变化中发现的复杂模式,无论是在倍性内部还是在倍性之间,最有可能是几个相互作用因素的结果,包括通过杂交双亲组合在欧洲西南部和东南部具有不同基因组大小的不同进化起源的倍性、倍性间的渐渗以及人为扩散。在塑造基因组大小方面,大尺度和小尺度环境变量的作用在葱属中可能并不重要。

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