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地球生命早期的氧气和过氧化氢:生物化学途径的计算机比较分析。

Oxygen and hydrogen peroxide in the early evolution of life on earth: in silico comparative analysis of biochemical pathways.

机构信息

Institute of Plant Physiology, Polish Academy of Sciences, Kraków, Poland.

出版信息

Astrobiology. 2012 Aug;12(8):775-84. doi: 10.1089/ast.2011.0704.

Abstract

In the Universe, oxygen is the third most widespread element, while on Earth it is the most abundant one. Moreover, oxygen is a major constituent of all biopolymers fundamental to living organisms. Besides O(2), reactive oxygen species (ROS), among them hydrogen peroxide (H(2)O(2)), are also important reactants in the present aerobic metabolism. According to a widely accepted hypothesis, aerobic metabolism and many other reactions/pathways involving O(2) appeared after the evolution of oxygenic photosynthesis. In this study, the hypothesis was formulated that the Last Universal Common Ancestor (LUCA) was at least able to tolerate O(2) and detoxify ROS in a primordial environment. A comparative analysis was carried out of a number of the O(2)-and H(2)O(2)-involving metabolic reactions that occur in strict anaerobes, facultative anaerobes, and aerobes. The results indicate that the most likely LUCA possessed O(2)-and H(2)O(2)-involving pathways, mainly reactions to remove ROS, and had, at least in part, the components of aerobic respiration. Based on this, the presence of a low, but significant, quantity of H(2)O(2) and O(2) should be taken into account in theoretical models of the early Archean atmosphere and oceans and the evolution of life. It is suggested that the early metabolism involving O(2)/H(2)O(2) was a key adaptation of LUCA to already existing weakly oxic zones in Earth's primordial environment.

摘要

在宇宙中,氧是第三大最广泛存在的元素,而在地球上,它是最丰富的元素。此外,氧是所有生物聚合物的主要组成部分,这些生物聚合物是生命有机体的基础。除了 O(2),活性氧物质 (ROS),其中包括过氧化氢 (H(2)O(2)),也是目前需氧代谢中的重要反应物。根据一个广泛接受的假说,有氧代谢和许多其他涉及 O(2)的反应/途径是在产氧光合作用进化后出现的。在这项研究中,提出了这样一个假设,即最后普遍共同祖先(LUCA)至少能够在原始环境中耐受 O(2)并解毒 ROS。对严格厌氧菌、兼性厌氧菌和需氧菌中发生的一些涉及 O(2)和 H(2)O(2)的代谢反应进行了比较分析。结果表明,最有可能的 LUCA 具有涉及 O(2)和 H(2)O(2)的途径,主要是清除 ROS 的反应,并且至少部分具有需氧呼吸的组成部分。基于这一点,在早期太古宙大气和海洋以及生命进化的理论模型中,应该考虑到低但显著数量的 H(2)O(2)和 O(2)的存在。有人认为,早期涉及 O(2)/H(2)O(2)的新陈代谢是 LUCA 对地球原始环境中已经存在的弱氧化区的关键适应。

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