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基于线粒体 DNA 的欧洲鲱鱼(Alosa alosa 和 A. fallax)的比较系统地理学和种群历史分析。

Comparative phylogeography and demographic history of European shads (Alosa alosa and A. fallax) inferred from mitochondrial DNA.

机构信息

CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO, Campus Agrário de Vairão, Universidade do Porto, 4485-661, Vairão, Portugal.

出版信息

BMC Evol Biol. 2012 Sep 30;12:194. doi: 10.1186/1471-2148-12-194.

Abstract

BACKGROUND

Comparative broad-scale phylogeographic studies of aquatic organisms provide insights on biotic responses to the paleohydrological dynamics associated with climatic oscillations. These insights can be used to formulate a framework for understanding the evolutionary history of a species or closely related taxa as well as aid in predictive modeling of further responses to climate change. Anadromous fishes constitute interesting models for understanding the relative importance of environmental versus biological factors in shaping intraspecific genetic substructure on the interface between marine and freshwater realms. European shads, Alosa alosa and A. fallax are anadromous species that have persisted through historical large-scale environmental perturbations and now additionally face an array of anthropogenic challenges. A comprehensive phylogeographic investigation of these species is needed to provide insights on both the historical processes that have shaped their extant genetic structure and diversity, and the prospects for their future management and conservation.

RESULTS

Despite introgressive hybridization, A. alosa and A. fallax are genetically divergent, congruent with previous studies. Three similarly divergent mtDNA clades were recognized within both A. fallax and A. alosa, most likely originating during common periods of isolation during the Pleistocene among the studied oceanographic regions. Periods of basin isolation apparently extended to the Black Sea as additional Alosa clades occur there. The present day geographic distribution of genetic diversity within European Alosa sp. suggests the existence of a strong but permeable barrier between the Atlantic and Mediterranean seas, as shown for a number of other aquatic species. Overall mtDNA diversity is considerably lower for A. alosa compared to A. fallax, suggesting that the former species is more sensitive to climatic as well as anthropogenic changes. For A. fallax, migration from the Mediterranean to the Atlantic was detected but not in the opposite direction, with colonization of the North Atlantic probably occurring after last glacial maximum.

CONCLUSION

The similar haplotype network topologies between the two species support a common intraspecific history of isolation. Despite these similarities, A. alosa and A. fallax have clearly responded differently to the hydrological dynamics of the Pleistocene, as reflected in their distinct demographic histories. As the species additionally occupy different ecological niches it should not be surprising that they differ in resilience to natural or human-mediated climatic changes. For A. fallax, it is further clear that its demographic response to large-scale hydrological events is not synchronized between the Atlantic and Mediterranean basins. These regional and species-specific differences should be incorporated into future predictive modeling of biological response to climate change as well as current management concepts.

摘要

背景

水生生物的比较广泛的系统地理学研究提供了关于生物对与气候波动相关的古水文动力学的反应的见解。这些见解可用于构建理解物种或密切相关分类群的进化历史的框架,并有助于对气候变化的进一步反应进行预测建模。溯河洄游鱼类是理解环境与生物因素在塑造海洋与淡水领域之间的种内遗传亚结构方面相对重要性的有趣模型。欧洲鲱鱼,即亚澳沙丁鱼(Alosa alosa)和亚澳拟沙丁鱼(A. fallax)是具有溯河洄游习性的物种,它们在历史上经历了大规模的环境干扰,现在还面临着一系列人为挑战。对这些物种进行全面的系统地理学研究,对于了解塑造其现存遗传结构和多样性的历史过程以及它们未来的管理和保护前景至关重要。

结果

尽管存在基因渐渗杂交,A. alosa 和 A. fallax 在遗传上是分化的,这与之前的研究一致。在 A. fallax 和 A. alosa 中都识别出了三个类似分化的 mtDNA 谱系,它们很可能是在研究的海洋学区域之间的更新世隔离期间起源的。盆地隔离期显然延伸到了黑海,因为那里还存在其他的亚澳沙丁鱼属的谱系。欧洲亚澳沙丁鱼属的遗传多样性的当前地理分布表明,大西洋和地中海之间存在着强大但可渗透的屏障,这一点在许多其他水生物种中都得到了证实。与 A. fallax 相比,A. alosa 的 mtDNA 多样性要低得多,这表明前者对气候和人为变化更为敏感。对于 A. fallax,检测到了从地中海向大西洋的迁移,但没有相反方向的迁移,北大西洋的殖民化可能发生在末次冰盛期之后。

结论

两个物种之间相似的单倍型网络拓扑结构支持了它们共同的种内隔离历史。尽管存在这些相似之处,但 A. alosa 和 A. fallax 显然对更新世的水文动态有不同的反应,这反映在它们不同的种群历史中。由于这些物种占据不同的生态位,它们对自然或人为引起的气候变化的恢复力不同也就不足为奇了。对于 A. fallax,更清楚的是,它对大规模水文事件的种群反应在大西洋和地中海盆地之间并不同步。这些区域和物种特异性差异应该被纳入未来对生物对气候变化的反应的预测模型中,以及当前的管理概念中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9f52/3523006/cd00d4eaf6fa/1471-2148-12-194-1.jpg

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