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本文引用的文献

1
X-ray structures of LeuT in substrate-free outward-open and apo inward-open states.无底物状态下外开放构象和apo 状态下内开放构象的 LeuT 的 X 射线结构。
Nature. 2012 Jan 9;481(7382):469-74. doi: 10.1038/nature10737.
2
Hydrogen bond dynamics in membrane protein function.膜蛋白功能中的氢键动力学
Biochim Biophys Acta. 2012 Apr;1818(4):942-50. doi: 10.1016/j.bbamem.2011.11.035. Epub 2011 Dec 8.
3
Bridging the gap between structure and kinetics of human SGLT1.弥合人 SGLT1 的结构与动力学之间的差距。
Am J Physiol Cell Physiol. 2012 May 1;302(9):C1293-305. doi: 10.1152/ajpcell.00397.2011. Epub 2011 Dec 7.
4
Thermochemistry of microhydration of sodiated and potassiated monosaccharides.钠离子和钾离子单糖水合的热化学。
J Am Soc Mass Spectrom. 2011 Sep;22(9):1570-6. doi: 10.1007/s13361-011-0175-z. Epub 2011 Jun 23.
5
The CH/π hydrogen bond in chemistry. Conformation, supramolecules, optical resolution and interactions involving carbohydrates.化学中的 CH/π 氢键。构象、超分子、涉及碳水化合物的光学拆分和相互作用。
Phys Chem Chem Phys. 2011 Aug 21;13(31):13873-900. doi: 10.1039/c1cp20404a. Epub 2011 May 25.
6
Biology of human sodium glucose transporters.人类钠-葡萄糖转运体的生物学特性。
Physiol Rev. 2011 Apr;91(2):733-94. doi: 10.1152/physrev.00055.2009.
7
Substrate specificity and ion coupling in the Na+/betaine symporter BetP.钠离子/甜菜碱同向转运蛋白 BetP 的底物特异性和离子偶联。
EMBO J. 2011 Apr 6;30(7):1221-9. doi: 10.1038/emboj.2011.46. Epub 2011 Mar 1.
8
Aromatic-Aromatic Interactions Database, A(2)ID: an analysis of aromatic π-networks in proteins.芳香族-芳香族相互作用数据库,A(2)ID:蛋白质中芳香族π-网络的分析。
Int J Biol Macromol. 2011 May 1;48(4):540-52. doi: 10.1016/j.ijbiomac.2011.01.008. Epub 2011 Jan 19.
9
The mechanism of sodium and substrate release from the binding pocket of vSGLT.vSGLT 结合口袋中钠和底物释放的机制。
Nature. 2010 Dec 16;468(7326):988-91. doi: 10.1038/nature09580. Epub 2010 Dec 5.
10
Glucose transport by human renal Na+/D-glucose cotransporters SGLT1 and SGLT2.人肾钠-葡萄糖协同转运蛋白 SGLT1 和 SGLT2 对葡萄糖的转运。
Am J Physiol Cell Physiol. 2011 Jan;300(1):C14-21. doi: 10.1152/ajpcell.00388.2010. Epub 2010 Oct 27.

具有芳香性的重要性:钠离子转运体中的π相互作用。

The importance of being aromatic: π interactions in sodium symporters.

机构信息

Department of Physiology, David Geffen School of Medicine at UCLA, Los Angeles, CA 90095-1751, USA.

出版信息

Biochemistry. 2012 Nov 27;51(47):9480-7. doi: 10.1021/bi301329w. Epub 2012 Nov 12.

DOI:10.1021/bi301329w
PMID:23116249
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3523751/
Abstract

In the LeuT family of sodium solute symporters, 13-17% of the residues in transmembrane domains are aromatic. The unique properties of aromatic amino acids allow them to play specialized roles in proteins, but their function in membrane transporters is underappreciated. Here we analyze the π bonding pattern in the LeuT (5TMIR) family and then describe the role of a triad of aromatic residues in sodium-dependent sugar cotransporters (SGLTs). In SLC5 symporters, three aromatic residues in TM6 (SGLT1 W289, Y290, and W291) are conserved in only those transporting sugars and inositols. We used biophysical analysis of mutants to discover their functional roles, which we have interpreted in terms of CH-π, π-π, and cation-π bonding. We discovered that (1) glucose binding involves CH-π stacking with Y290, (2) π T-stacking interactions between Y290 and W291 and H-bonding between Y290 and N78 (TM1) are essential to form the sodium and sugar binding sites, (3) the Na(+):sugar stoichiometry is determined by these residues, and (4) W289 may be important in stabilizing the structure through H-bonding to TM3. We also find that the WYW triad plays a role in Na(+) coordination at the Na1 site, possibly through cation-π interactions. Surprisingly, this Na(+) is not necessarily coupled to glucose translocation. Our analysis of π interactions in other LeuT proteins suggests that they also contribute to the structure and function in this whole family of transporters.

摘要

在 LeuT 家族的钠离子溶质协同转运体中,跨膜结构域中有 13-17%的残基是芳香族氨基酸。芳香族氨基酸的独特性质使它们能够在蛋白质中发挥特殊作用,但它们在膜转运体中的功能尚未被充分认识。在这里,我们分析了 LeuT(5TMIR)家族的π键合模式,然后描述了在钠离子依赖的糖协同转运体(SGLTs)中三个芳香族残基的作用。在 SLC5 协同转运体中,TM6 中的三个芳香族残基(SGLT1 W289、Y290 和 W291)仅在那些转运糖和肌醇的转运体中保守。我们使用突变体的生物物理分析来发现它们的功能作用,并根据 CH-π、π-π 和阳离子-π 键合来解释这些作用。我们发现:(1)葡萄糖结合涉及 Y290 的 CH-π 堆积;(2)Y290 和 W291 之间的 π T-堆积相互作用以及 Y290 和 N78(TM1)之间的氢键对于形成钠离子和糖结合位点是必不可少的;(3)Na(+):糖的比例取决于这些残基;(4)W289 可能通过与 TM3 的氢键稳定结构。我们还发现 WYW 三联体在 Na1 位点的 Na(+)配位中起作用,可能通过阳离子-π 相互作用。令人惊讶的是,这种 Na(+)不一定与葡萄糖转运有关。我们对其他 LeuT 蛋白中π相互作用的分析表明,它们也有助于整个转运体家族的结构和功能。