Unit of Medical Technology and Intelligent Information Systems, Department of Materials Science and Engineering, University of Ioannina, GR45110 Ioannina, Greece.
BMC Med Inform Decis Mak. 2012 Nov 22;12:136. doi: 10.1186/1472-6947-12-136.
In this work, we propose a multilevel and multiparametric approach in order to model the growth and progression of oral squamous cell carcinoma (OSCC) after remission. OSCC constitutes the major neoplasm of the head and neck region, exhibiting a quite aggressive nature, often leading to unfavorable prognosis.
We formulate a Decision Support System assembling a multitude of heterogeneous data sources (clinical, imaging tissue and blood genomic), aiming to capture all manifestations of the disease. Our primary aim is to identify the factors that dictate OSCC progression and subsequently predict potential relapses of the disease. The discrimination potential of each source of data is initially explored separately, and afterwards the individual predictions are combined to yield a consensus decision achieving complete discrimination between patients with and without a disease relapse. Moreover, we collect and analyze gene expression data from circulating blood cells throughout the follow-up period in consecutive time-slices, in order to model the temporal dimension of the disease. For this purpose a Dynamic Bayesian Network (DBN) is employed which is able to capture in a transparent manner the underlying mechanism dictating the disease evolvement, and employ it for monitoring the status and prognosis of the patients after remission.
By feeding as input to the DBN data from the baseline visit we achieve accuracy of 86%, which is further improved to complete discrimination when data from the first follow-up visit are also employed.
Knowing in advance the progression of the disease, i.e. identifying groups of patients with higher/lower risk of reoccurrence, we are able to determine the subsequent treatment protocol in a more personalized manner.
在这项工作中,我们提出了一种多层次和多参数的方法,以便对缓解后的口腔鳞状细胞癌(OSCC)的生长和进展进行建模。OSCC 构成了头颈部区域的主要肿瘤,具有相当侵袭性的性质,常常导致不良的预后。
我们构建了一个决策支持系统,汇集了多种异构数据源(临床、成像组织和血液基因组),旨在捕捉疾病的所有表现。我们的主要目标是确定决定 OSCC 进展的因素,然后预测疾病的潜在复发。单独探索每个数据源的区分潜力,然后将个体预测组合起来,以达成疾病缓解患者和复发患者之间的完全区分。此外,我们在连续的时间片中收集和分析来自循环血细胞的基因表达数据,以对疾病的时间维度进行建模。为此,我们采用了一个动态贝叶斯网络(DBN),它能够以透明的方式捕捉决定疾病演变的潜在机制,并将其用于监测患者缓解后的状态和预后。
通过将基线就诊时的数据输入到 DBN 中,我们实现了 86%的准确率,当第一次随访时的数据也被纳入时,准确率进一步提高到完全区分。
提前了解疾病的进展,即识别具有更高/更低复发风险的患者群体,我们能够以更个性化的方式确定后续的治疗方案。