Department of Pathology, Genentech, Inc., South San Francisco, CA 94080, USA.
Clin Cancer Res. 2013 Feb 15;19(4):773-84. doi: 10.1158/1078-0432.CCR-12-2638. Epub 2012 Dec 6.
This study is aimed to identify genes within the KRAS genomic amplicon that are both coupregulated and essential for cell proliferation when KRAS is amplified in lung cancer.
We used an integrated genomic approach to identify genes that are coamplified with KRAS in lung adenocarcinomas and subsequently preformed an RNA interference (RNAi) screen to uncover functionally relevant genes. The role of lactate dehydrogenase B (LDHB) was subsequently investigated both in vitro and in vivo by siRNA and short hairpin RNA (shRNA)-mediated knockdown in a panel of lung adenocarcinoma cells lines. LDHB expression was also investigated in patient tumors using microarray and immunohistochemistry analyses.
RNAi-mediated depletion of LDHB abrogated cell proliferation both in vitro and in xenografted tumors in vivo. We find that LDHB expression correlates to both KRAS genomic copy number gain and KRAS mutation in lung cancer cell lines and adenocarcinomas. This correlation between LDHB expression and KRAS status is specific for lung cancers and not other tumor types that harbor KRAS mutations. Consistent with a role for LDHB in glycolysis and tumor metabolism, KRAS-mutant lung tumors exhibit elevated expression of a glycolysis gene signature and are more dependent on glycolysis for proliferation compared with KRAS wild-type lung tumors. Finally, high LDHB expression was a significant predictor of shorter survival in patients with lung adenocarcinomas.
This study identifies LDHB as a regulator of cell proliferation in a subset of lung adenocarcinoma and may provide a novel therapeutic approach for treating lung cancer.
本研究旨在鉴定 KRAS 基因组扩增时与 KRAS 共同上调且对细胞增殖至关重要的基因。
我们采用整合基因组学方法鉴定肺腺癌中与 KRAS 共同扩增的基因,随后进行 RNA 干扰(RNAi)筛选,以揭示具有功能相关性的基因。随后通过在一系列肺腺癌细胞系中使用 siRNA 和短发夹 RNA(shRNA)介导的敲低来研究乳酸脱氢酶 B(LDHB)的作用。还使用微阵列和免疫组织化学分析在患者肿瘤中研究 LDHB 表达。
RNAi 介导的 LDHB 耗竭既在体外又在体内异种移植肿瘤中消除了细胞增殖。我们发现 LDHB 表达与肺腺癌细胞系和腺癌中 KRAS 基因组拷贝数增加和 KRAS 突变相关。LDHB 表达与 KRAS 状态之间的这种相关性是肺肿瘤所特有的,而不是其他携带 KRAS 突变的肿瘤类型。与 LDHB 在糖酵解和肿瘤代谢中的作用一致,KRAS 突变型肺肿瘤表现出糖酵解基因特征的升高表达,并且与 KRAS 野生型肺肿瘤相比,更依赖于糖酵解进行增殖。最后,高 LDHB 表达是肺腺癌患者生存时间较短的显著预测因素。
本研究鉴定出 LDHB 是肺腺癌亚群中细胞增殖的调节因子,可能为治疗肺癌提供新的治疗方法。