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人类血小板 microRNAs 的组成和特征。

The repertoire and features of human platelet microRNAs.

机构信息

Centre Hospitalier Universitaire de Québec Research Center/Centre hospitalier de l'Université Laval, Quebec, Quebec, Canada.

出版信息

PLoS One. 2012;7(12):e50746. doi: 10.1371/journal.pone.0050746. Epub 2012 Dec 4.

DOI:10.1371/journal.pone.0050746
PMID:23226537
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3514217/
Abstract

Playing a central role in the maintenance of hemostasis as well as in thrombotic disorders, platelets contain a relatively diverse messenger RNA (mRNA) transcriptome as well as functional mRNA-regulatory microRNAs, suggesting that platelet mRNAs may be regulated by microRNAs. Here, we elucidated the complete repertoire and features of human platelet microRNAs by high-throughput sequencing. More than 492 different mature microRNAs were detected in human platelets, whereas the list of known human microRNAs was expanded further by the discovery of 40 novel microRNA sequences. As in nucleated cells, platelet microRNAs bear signs of post-transcriptional modifications, mainly terminal adenylation and uridylation. In vitro enzymatic assays demonstrated the ability of human platelets to uridylate microRNAs, which correlated with the presence of the uridyltransferase enzyme TUT4. We also detected numerous microRNA isoforms (isomiRs) resulting from imprecise Drosha and/or Dicer processing, in some cases more frequently than the reference microRNA sequence, including 5' shifted isomiRs with redirected mRNA targeting abilities. This study unveils the existence of a relatively diverse and complex microRNA repertoire in human platelets, and represents a mandatory step towards elucidating the intraplatelet and extraplatelet role, function and importance of platelet microRNAs.

摘要

血小板在止血和血栓形成障碍中发挥着核心作用,其含有相对多样化的信使 RNA(mRNA)转录组和功能性 mRNA 调节 microRNA,这表明血小板 mRNA 可能受到 microRNA 的调控。在这里,我们通过高通量测序阐明了人类血小板 microRNA 的完整组成和特征。在人类血小板中检测到超过 492 种不同的成熟 microRNA,而通过发现 40 种新的 microRNA 序列,进一步扩展了已知的人类 microRNA 列表。与核细胞一样,血小板 microRNA 具有转录后修饰的特征,主要是末端腺苷酸化和尿嘧啶化。体外酶促测定表明人类血小板具有尿嘧啶化 microRNA 的能力,这与尿嘧啶转移酶 TUT4 的存在相关。我们还检测到许多 microRNA 同种型(isomiRs),这些同种型是由 Drosha 和/或 Dicer 加工的不精确性引起的,在某些情况下比参考 microRNA 序列更频繁,包括具有重新定向 mRNA 靶向能力的 5'移位 isomiRs。本研究揭示了人类血小板中存在相对多样化和复杂的 microRNA 组,这是阐明血小板 microRNA 的血小板内和血小板外作用、功能和重要性的必要步骤。

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Accurate microRNA Target Prediction Using Detailed Binding Site Accessibility and Machine Learning on Proteomics Data.
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Commonalities of platelet dysfunction in heart failure with preserved ejection fraction and underlying comorbidities.射血分数保留的心力衰竭及潜在合并症中血小板功能障碍的共性
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