Queensland Centre for Medical Genomics, Institute for Molecular Bioscience, The University of Queensland, St Lucia, QLD, Australia.
RNA. 2013 Feb;19(2):230-42. doi: 10.1261/rna.034926.112. Epub 2012 Dec 18.
MicroRNAs are noncoding regulators of gene expression, which act by repressing protein translation and/or degrading mRNA. Many have been shown to drive tumorigenesis in cancer, but functional studies to understand their mode of action are typically limited to single-target genes. In this study, we use synthetic biotinylated miRNA to pull down endogenous targets of miR-182-5p. We identified more than 1000 genes as potential targets of miR-182-5p, most of which have a known function in pathways underlying tumor biology. Specifically, functional enrichment analysis identified components of both the DNA damage response pathway and cell cycle to be highly represented in this target cohort. Experimental validation confirmed that miR-182-5p-mediated disruption of the homologous recombination (HR) pathway is a consequence of its ability to target multiple components in that pathway. Although there is a strong enrichment for the cell cycle ontology, we do not see primary proliferative defects as a consequence of miR-182-5p overexpression. We highlight targets that could be responsible for miR-182-5p-mediated disruption of other biological processes attributed in the literature so far. Finally, we show that miR-182-5p is highly expressed in a panel of human breast cancer samples, highlighting its role as a potential oncomir in breast cancer.
MicroRNAs 是基因表达的非编码调控因子,通过抑制蛋白质翻译和/或降解 mRNA 来发挥作用。许多 miRNA 已被证明在癌症中驱动肿瘤发生,但为了理解其作用模式而进行的功能研究通常仅限于单个靶基因。在这项研究中,我们使用合成生物素化 miRNA 下拉内源性 miR-182-5p 的靶基因。我们鉴定了 1000 多个可能是 miR-182-5p 靶基因的基因,其中大多数在肿瘤生物学相关途径中具有已知功能。具体来说,功能富集分析发现,DNA 损伤反应途径和细胞周期的多个组成部分在这个靶基因群体中高度表达。实验验证证实,miR-182-5p 对同源重组(HR)途径的破坏是其靶向该途径多个组成部分的结果。尽管细胞周期本体论有很强的富集,但我们没有看到 miR-182-5p 过表达导致原发性增殖缺陷。我们强调了那些可能是迄今为止文献中归因于 miR-182-5p 介导的其他生物学过程破坏的靶基因。最后,我们表明 miR-182-5p 在一组人类乳腺癌样本中高度表达,突出了它在乳腺癌中作为潜在致癌 miRNA 的作用。