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木腐真菌 Xenomic 网络变异性和适应特性。

Xenomic networks variability and adaptation traits in wood decaying fungi.

机构信息

Université de Lorraine, IAM, UMR 1136, IFR 110 EFABA, Vandoeuvre-lès-Nancy, F-54506, France.

出版信息

Microb Biotechnol. 2013 May;6(3):248-63. doi: 10.1111/1751-7915.12015. Epub 2013 Jan 2.

Abstract

Fungal degradation of wood is mainly restricted to basidiomycetes, these organisms having developed complex oxidative and hydrolytic enzymatic systems. Besides these systems, wood-decaying fungi possess intracellular networks allowing them to deal with the myriad of potential toxic compounds resulting at least in part from wood degradation but also more generally from recalcitrant organic matter degradation. The members of the detoxification pathways constitute the xenome. Generally, they belong to multigenic families such as the cytochrome P450 monooxygenases and the glutathione transferases. Taking advantage of the recent release of numerous genomes of basidiomycetes, we show here that these multigenic families are extended and functionally related in wood-decaying fungi. Furthermore, we postulate that these rapidly evolving multigenic families could reflect the adaptation of these fungi to the diversity of their substrate and provide keys to understand their ecology. This is of particular importance for white biotechnology, this xenome being a putative target for improving degradation properties of these fungi in biomass valorization purposes.

摘要

真菌对木材的降解主要局限于担子菌,这些生物体已经开发出复杂的氧化和水解酶系统。除了这些系统,木材腐朽真菌还具有细胞内网络,使它们能够应对无数潜在的有毒化合物,这些化合物至少部分来自木材降解,但更普遍地来自难降解有机物的降解。解毒途径的成员构成了异基因组。一般来说,它们属于多基因家族,如细胞色素 P450 单加氧酶和谷胱甘肽转移酶。利用最近发布的许多担子菌基因组,我们在这里表明,这些多基因家族在木材腐朽真菌中得到了扩展和功能上的关联。此外,我们假设这些快速进化的多基因家族可能反映了这些真菌对其基质多样性的适应,并为理解它们的生态提供了关键信息。这对于白色生物技术尤其重要,这个异基因组是提高这些真菌在生物质增值目的中降解性能的潜在目标。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06fe/3815920/a0cbf553e789/mbt0006-0248-f1.jpg

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