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木腐担子菌的细胞色素P450及其生物技术应用。

Cytochrome P450 of wood-rotting basidiomycetes and biotechnological applications.

作者信息

Ichinose Hirofumi

机构信息

Faculty of Agriculture, Kyushu University, Fukuoka, Japan.

出版信息

Biotechnol Appl Biochem. 2013 Jan-Feb;60(1):71-81. doi: 10.1002/bab.1061. Epub 2013 Jan 11.

Abstract

Wood-rotting basidiomycetes possess superior metabolic functions to degrade woody biomass, and these activities are indispensable for the carbon cycle of the biosphere. As well as basic studies of the biochemistry of basidiomycetes, many researchers have been focusing on utilizing basidiomycetes and/or their enzymes in the biotechnology sector; therefore, the unique activities of their extracellular and intracellular enzymes have been widely demonstrated. A rich history of applied study has established that basidiomycetes are capable of metabolizing a series of endogeneous and exogeneous compounds using cytochrome P450s (P450s). Recently, whole genome sequence analyses have revealed large-scale divergences in basidiomycetous P450s. The tremendous variation in P450s implies that basidiomycetes have vigorously diversified monooxygenase functions to acquire metabolic adaptations such as lignin degradation, secondary metabolite production, and xenobiotics detoxification. However, fungal P450s discovered from genome projects are often categorized into novel families and subfamilies, making it difficult to predict catalytic functions by sequence comparison. Experimental screening therefore remains essential to elucidate the catalytic potential of individual P450s, even in this postgenomic era. This paper archives the known metabolic capabilities of basidiomycetes, focusing on their P450s, outlines the molecular diversity of basidiomycetous P450s, and introduces new functions revealed by functionomic studies using a recently developed, rapid, functional screening system.

摘要

木腐担子菌具有卓越的代谢功能来降解木质生物质,这些活动对于生物圈的碳循环不可或缺。除了对担子菌生物化学的基础研究外,许多研究人员一直致力于在生物技术领域利用担子菌和/或其酶;因此,它们细胞外和细胞内酶的独特活性已得到广泛证明。丰富的应用研究历史表明,担子菌能够利用细胞色素P450(P450s)代谢一系列内源性和外源性化合物。最近,全基因组序列分析揭示了担子菌P450s的大规模差异。P450s的巨大变异意味着担子菌具有多样化的单加氧酶功能,以获得诸如木质素降解、次级代谢产物产生和外源性物质解毒等代谢适应性。然而,从基因组计划中发现的真菌P450s通常被归类为新的家族和亚家族,通过序列比较很难预测其催化功能。因此,即使在这个后基因组时代,实验筛选对于阐明单个P450s的催化潜力仍然至关重要。本文记录了担子菌已知的代谢能力,重点关注其P450s,概述了担子菌P450s的分子多样性,并介绍了使用最近开发的快速功能筛选系统通过功能组学研究揭示的新功能。

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