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细胞内与 K63-多聚泛素链相连的蛋白质为何不与蛋白酶体结合?

Why do cellular proteins linked to K63-polyubiquitin chains not associate with proteasomes?

机构信息

Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.

出版信息

EMBO J. 2013 Feb 20;32(4):552-65. doi: 10.1038/emboj.2012.354. Epub 2013 Jan 11.

DOI:10.1038/emboj.2012.354
PMID:23314748
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3579138/
Abstract

Although cellular proteins conjugated to K48-linked Ub chains are targeted to proteasomes, proteins conjugated to K63-ubiquitin chains are directed to lysosomes. However, pure 26S proteasomes bind and degrade K48- and K63-ubiquitinated substrates similarly. Therefore, we investigated why K63-ubiquitinated proteins are not degraded by proteasomes. We show that mammalian cells contain soluble factors that selectively bind to K63 chains and inhibit or prevent their association with proteasomes. Using ubiquitinated proteins as affinity ligands, we found that the main cellular proteins that associate selectively with K63 chains and block their binding to proteasomes are ESCRT0 (Endosomal Sorting Complex Required for Transport) and its components, STAM and Hrs. In vivo, knockdown of ESCRT0 confirmed that it is required to block binding of K63-ubiquitinated molecules to the proteasome. In addition, the Rad23 proteins, especially hHR23B, were found to bind specifically to K48-ubiquitinated proteins and to stimulate proteasome binding. The specificities of these proteins for K48- or K63-ubiquitin chains determine whether a ubiquitinated protein is targeted for proteasomal degradation or delivered instead to the endosomal-lysosomal pathway.

摘要

虽然连接到 K48 连接的 Ub 链的细胞蛋白被靶向到蛋白酶体,但连接到 K63-泛素链的蛋白被定向到溶酶体。然而,纯 26S 蛋白酶体以相似的方式结合并降解 K48 和 K63-泛素化的底物。因此,我们研究了为什么 K63-泛素化的蛋白质不能被蛋白酶体降解。我们表明哺乳动物细胞中含有可溶性因子,这些因子选择性地与 K63 链结合,并抑制或阻止它们与蛋白酶体的结合。使用泛素化蛋白作为亲和配体,我们发现与 K63 链选择性结合并阻止其与蛋白酶体结合的主要细胞蛋白是 ESCRT0(内体分选复合物必需的运输)及其成分 STAM 和 Hrs。在体内,ESCRT0 的敲低证实它是阻止 K63-泛素化分子与蛋白酶体结合所必需的。此外,发现 Rad23 蛋白,特别是 hHR23B,特异性结合 K48-泛素化蛋白并刺激蛋白酶体结合。这些蛋白对 K48 或 K63-泛素链的特异性决定了泛素化蛋白是被靶向到蛋白酶体降解还是被递送到内体溶酶体途径。

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本文引用的文献

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The proteasomal de-ubiquitinating enzyme POH1 promotes the double-strand DNA break response.蛋白酶体去泛素化酶 POH1 促进双链 DNA 断裂反应。
EMBO J. 2012 Oct 3;31(19):3918-34. doi: 10.1038/emboj.2012.232. Epub 2012 Aug 21.
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How ubiquitin functions with ESCRTs.泛素与 ESCRTs 的作用方式。
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Polyubiquitin linkage profiles in three models of proteolytic stress suggest the etiology of Alzheimer disease.三种蛋白水解应激模型中的多泛素连接谱提示阿尔茨海默病的病因。
J Biol Chem. 2011 Mar 25;286(12):10457-65. doi: 10.1074/jbc.M110.149633. Epub 2011 Jan 28.
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HRD1 and UBE2J1 target misfolded MHC class I heavy chains for endoplasmic reticulum-associated degradation.HRD1 和 UBE2J1 靶向错误折叠的 MHC Ⅰ类重链进行内质网相关降解。
Proc Natl Acad Sci U S A. 2011 Feb 1;108(5):2034-9. doi: 10.1073/pnas.1016229108. Epub 2011 Jan 18.
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ATP-dependent steps in the binding of ubiquitin conjugates to the 26S proteasome that commit to degradation.ATP 依赖的泛素缀合物与 26S 蛋白酶体结合的步骤,这些步骤决定了降解的命运。
Mol Cell. 2010 Nov 24;40(4):671-81. doi: 10.1016/j.molcel.2010.11.002.
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Enhancement of proteasome activity by a small-molecule inhibitor of USP14.小分子抑制剂 USP14 对蛋白酶体活性的增强作用。
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VHS domains of ESCRT-0 cooperate in high-avidity binding to polyubiquitinated cargo.ESCRT-0 的 VHS 结构域协同高亲和力结合多泛素化货物。
EMBO J. 2010 Mar 17;29(6):1045-54. doi: 10.1038/emboj.2010.6. Epub 2010 Feb 11.
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Ubiquitinated proteins activate the proteasome by binding to Usp14/Ubp6, which causes 20S gate opening.泛素化蛋白通过结合 Usp14/Ubp6 激活蛋白酶体,导致 20S 门打开。
Mol Cell. 2009 Dec 11;36(5):794-804. doi: 10.1016/j.molcel.2009.11.015.
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The lysine 48 and lysine 63 ubiquitin conjugates are processed differently by the 26 s proteasome.赖氨酸 48 和赖氨酸 63 泛素缀合物通过 26S 蛋白酶体被不同地处理。
J Biol Chem. 2009 Dec 18;284(51):35485-94. doi: 10.1074/jbc.M109.052928.
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Recognition and processing of ubiquitin-protein conjugates by the proteasome.蛋白酶体对泛素-蛋白质缀合物的识别与加工。
Annu Rev Biochem. 2009;78:477-513. doi: 10.1146/annurev.biochem.78.081507.101607.