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嗜水格拉氏菌新种,从河口环境的水中分离得到。

Gramella aquimixticola sp. nov., isolated from water of an estuary environment.

作者信息

Park Sooyeon, Kim Sona, Jung Yong-Taek, Yoon Jung-Hoon

机构信息

Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, Republic of Korea.

University of Science and Technology (UST), 113 Gwahak-ro, Yuseong-gu, Daejeon, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2015 Nov;65(11):4244-4249. doi: 10.1099/ijsem.0.000567. Epub 2015 Aug 27.

Abstract

A Gram-stain-negative, aerobic, non-spore-forming bacterial strain, motile by gliding and with rod-shaped or ovoid cells, was isolated from water of an estuary environment at Hwajinpo, South Korea. The strain was designated HJM-19T and subjected to a polyphasic taxonomic study. The novel strain grew optimally at 30 °C, at pH 7.0-8.0 and in the presence of 1.0-2.0 % (w/v) NaCl. Phylogenetic trees based on 16S rRNA gene sequences revealed that strain HJM-19T belongs to the genus Gramella. It exhibited 16S rRNA gene sequence similarity values of 97.2-98.1 % to the type strains of Gramella portivictoriae, Gramella aestuariivivens, Gramella marina, Gramella echinicola and Gramella aestuarii, and of 93.9-96.5 % to the type strains of the other species of the genus Gramella with validly published names. Strain HJM-19T contained MK-6 as the predominant menaquinone and anteiso-C15 : 0, anteiso-C17 : 1ω9c and C17 : 0 2-OH as the major fatty acids. The major polar lipids of strain HJM-19T were phosphatidylethanolamine and two unidentified lipids. The DNA G+C content of strain HJM-19T was 48.0 mol%, and its DNA-DNA relatedness values with the type strains of the five phylogenetically closely related species of the genus Gramella were 11-23 %. The differential phenotypic properties, together with the phylogenetic and genetic distinctiveness, revealed that strain HJM-19T is separated from other species of the genus Gramella. On the basis of the data presented, strain HJM-19T is considered to represent a novel species of the genus Gramella, for which the name Gramella aquimixticola sp. nov. is proposed. The type strain is HJM-19T ( = KCTC 42706T = NBRC 111224T).

摘要

从韩国花津浦河口环境的水中分离出一株革兰氏染色阴性、需氧、不形成芽孢的细菌菌株,通过滑行运动,细胞呈杆状或卵形。该菌株被命名为HJM-19T,并进行了多相分类学研究。该新菌株在30 °C、pH 7.0 - 8.0以及1.0 - 2.0 %(w/v)NaCl存在的条件下生长最佳。基于16S rRNA基因序列构建的系统发育树表明,菌株HJM-19T属于革兰氏菌属。它与维多利亚港革兰氏菌、河口生境革兰氏菌、海洋革兰氏菌、棘刺革兰氏菌和河口革兰氏菌的模式菌株的16S rRNA基因序列相似性值为97.2 - 98.1 %,与革兰氏菌属其他有效发表名称物种的模式菌株的相似性值为93.9 - 96.5 %。菌株HJM-19T以MK-6作为主要甲基萘醌,以anteiso-C15 : 0、anteiso-C17 : 1ω9c和C17 : 0 2-OH作为主要脂肪酸。菌株HJM-19T的主要极性脂类为磷脂酰乙醇胺和两种未鉴定的脂类。菌株HJM-19T的DNA G+C含量为48.0 mol%,其与革兰氏菌属五个系统发育密切相关物种的模式菌株的DNA-DNA相关性值为11 - 23 %。不同的表型特征,以及系统发育和遗传独特性,表明菌株HJM-19T与革兰氏菌属的其他物种不同。基于所提供的数据,菌株HJM-19T被认为代表革兰氏菌属的一个新物种,为此提出名为混合水革兰氏菌(Gramella aquimixticola sp. nov.)。模式菌株为HJM-19T( = KCTC 42706T = NBRC 111224T)。

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