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沙生黏胶菌属,一种新的海洋沉积物分离菌。

Mucilaginibacter sabulilitoris sp. nov., isolated from marine sand in a firth.

机构信息

University of Science and Technology (UST), 113 Gwahangno, Yuseong, Daejeon, South Korea.

Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, South Korea.

出版信息

Int J Syst Evol Microbiol. 2013 Aug;63(Pt 8):2865-2871. doi: 10.1099/ijs.0.045989-0. Epub 2013 Jan 11.

Abstract

A Gram-stain-negative, non-spore-forming, strictly aerobic, non-flagellated, non-gliding, rod-shaped bacterial strain, designated SMS-12(T), was isolated from marine sand in a firth on the western coast of South Korea. Strain SMS-12(T) grew optimally at 25 °C, at pH 7.0-7.5 and in the absence of NaCl. Phylogenetic trees based on 16S rRNA gene sequences revealed that strain SMS-12(T) fell within the clade comprising species of the genus Mucilaginibacter, forming a coherent cluster with the type strain of Mucilaginibacter lappiensis, with which it exhibited the highest 16S rRNA gene sequence similarity value of 97.5 %. Levels of sequence similarity to the type strains of the other species of the genus Mucilaginibacter and the other species used in the phylogenetic analysis were 93.3-96.4 % and <91.5 %, respectively. Strain SMS-12(T) contained MK-7 as the predominant menaquinone, and summed feature 3 (C16 : 1ω7c and/or iso-C15 : 0 2-OH), iso-C15 : 0 and iso-C17 : 0 3-OH as the major fatty acids. The major polar lipids were phosphatidylethanolamine and one unidentified aminophospholipid; sphingolipids were present. The DNA G+C content was 41.8 mol% and the mean DNA-DNA relatedness with M. lappiensis KACC 14978(T) was 13 %. Differential phenotypic properties, together with phylogenetic and genetic distinctiveness, revealed that strain SMS-12(T) is separate from other species of the genus Mucilaginibacter. On the basis of the data presented, strain SMS-12(T) is considered to represent a novel species of the genus Mucilaginibacter, for which the name Mucilaginibacter sabulilitoris sp. nov. is proposed. The type strain is SMS-12(T) ( = KCTC 32111(T) = CCUG 62214(T)).

摘要

一株革兰氏阴性、不产芽孢、严格需氧、无鞭毛、不滑行、杆状的细菌菌株,被命名为 SMS-12(T),从韩国西海岸峡湾的海洋沙中分离得到。SMS-12(T) 菌株在 25°C、pH7.0-7.5 和无 NaCl 的条件下生长最佳。基于 16S rRNA 基因序列的系统发育树表明,SMS-12(T) 菌株属于粘杆菌属的种,与粘杆菌属的模式种粘杆菌属菌形成一个连贯的聚类,与模式种的 16S rRNA 基因序列相似性最高为 97.5%。与属内其他种的模式菌株和系统发育分析中使用的其他种的 16S rRNA 基因序列相似性水平分别为 93.3-96.4%和<91.5%。SMS-12(T) 菌株含有 MK-7 作为主要的menaquinone,以及总和特征 3(C16:1ω7c 和/或 iso-C15:0 2-OH)、iso-C15:0 和 iso-C17:0 3-OH 作为主要脂肪酸。主要的极性脂是磷脂酰乙醇胺和一种未鉴定的氨基磷脂;存在鞘脂。DNA G+C 含量为 41.8mol%,与粘杆菌属菌 KACC 14978(T)的平均 DNA-DNA 相关性为 13%。表型特征的差异,加上系统发育和遗传上的独特性,表明 SMS-12(T) 菌株与粘杆菌属的其他种不同。基于所提供的数据,SMS-12(T) 菌株被认为代表了粘杆菌属的一个新种,因此提议将其命名为粘杆菌属沙利托利氏菌新种。模式菌株是 SMS-12(T)(=KCTC 32111(T)=CCUG 62214(T))。

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