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个体细菌细胞集落生长动力学中的随机性。

Stochasticity in colonial growth dynamics of individual bacterial cells.

机构信息

Laboratory of Food Microbiology and Hygiene, Department of Food Science and Technology, School of Agriculture, Aristotle University of Thessaloniki, Thessaloniki, Greece.

出版信息

Appl Environ Microbiol. 2013 Apr;79(7):2294-301. doi: 10.1128/AEM.03629-12. Epub 2013 Jan 25.

Abstract

Conventional bacterial growth studies rely on large bacterial populations without considering the individual cells. Individual cells, however, can exhibit marked behavioral heterogeneity. Here, we present experimental observations on the colonial growth of 220 individual cells of Salmonella enterica serotype Typhimurium using time-lapse microscopy videos. We found a highly heterogeneous behavior. Some cells did not grow, showing filamentation or lysis before division. Cells that were able to grow and form microcolonies showed highly diverse growth dynamics. The quality of the videos allowed for counting the cells over time and estimating the kinetic parameters lag time (λ) and maximum specific growth rate (μmax) for each microcolony originating from a single cell. To interpret the observations, the variability of the kinetic parameters was characterized using appropriate probability distributions and introduced to a stochastic model that allows for taking into account heterogeneity using Monte Carlo simulation. The model provides stochastic growth curves demonstrating that growth of single cells or small microbial populations is a pool of events each one of which has its own probability to occur. Simulations of the model illustrated how the apparent variability in population growth gradually decreases with increasing initial population size (N(0)). For bacterial populations with N(0) of >100 cells, the variability is almost eliminated and the system seems to behave deterministically, even though the underlying law is stochastic. We also used the model to demonstrate the effect of the presence and extent of a nongrowing population fraction on the stochastic growth of bacterial populations.

摘要

传统的细菌生长研究依赖于不考虑单个细胞的大量细菌群体。然而,单个细胞可以表现出明显的行为异质性。在这里,我们使用延时显微镜视频展示了对 220 个沙门氏菌血清型 Typhimurium 个体细胞的群体生长的实验观察。我们发现了高度异质的行为。一些细胞没有生长,在分裂前出现丝状或裂解。能够生长并形成微菌落的细胞表现出高度多样化的生长动态。视频的质量允许我们随时间计数细胞,并为每个源自单个细胞的微菌落估计动力学参数迟滞时间 (λ) 和最大比生长速率 (μmax)。为了解释观察结果,使用适当的概率分布对动力学参数的可变性进行了特征描述,并将其引入到允许使用蒙特卡罗模拟考虑异质性的随机模型中。该模型提供了随机生长曲线,表明单细胞或小微生物群体的生长是一系列事件的集合,每个事件都有其自身发生的概率。该模型的模拟说明了随着初始种群数量 (N(0)) 的增加,种群生长的明显可变性如何逐渐降低。对于 N(0) 大于 100 个细胞的细菌种群,可变性几乎消除,系统似乎表现出确定性,即使潜在的规律是随机的。我们还使用该模型来演示非生长种群分数的存在和程度对细菌种群的随机生长的影响。

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