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本文引用的文献

1
Genome-wide identification of in vivo binding sites of GlxR, a cyclic AMP receptor protein-type regulator in Corynebacterium glutamicum.全基因组鉴定谷氨酸棒杆菌中 cAMP 受体蛋白型调控因子 GlxR 的体内结合位点。
J Bacteriol. 2011 Aug;193(16):4123-33. doi: 10.1128/JB.00384-11. Epub 2011 Jun 10.
2
Transcriptional regulators of multiple genes involved in carbon metabolism in Corynebacterium glutamicum.参与谷氨酸棒杆菌碳代谢的多个基因的转录调控因子。
J Biotechnol. 2011 Jul 10;154(2-3):114-25. doi: 10.1016/j.jbiotec.2011.01.016. Epub 2011 Jan 26.
3
Regulation of genes involved in sugar uptake, glycolysis and lactate production in Corynebacterium glutamicum.调控谷氨酸棒杆菌中参与糖摄取、糖酵解和乳酸生成的基因。
Future Microbiol. 2010 Oct;5(10):1475-81. doi: 10.2217/fmb.10.114.
4
Citrate synthase in Corynebacterium glutamicum is encoded by two gltA transcripts which are controlled by RamA, RamB, and GlxR.谷氨酸棒杆菌中的柠檬酸合酶由两个 gltA 转录本编码,这两个转录本受 RamA、RamB 和 GlxR 调控。
J Biotechnol. 2011 Jul 10;154(2-3):140-8. doi: 10.1016/j.jbiotec.2010.07.004. Epub 2010 Jul 12.
5
RamA and RamB are global transcriptional regulators in Corynebacterium glutamicum and control genes for enzymes of the central metabolism.RamA 和 RamB 是谷氨酸棒杆菌中的全局转录调控因子,它们控制着中心代谢途径中酶的基因。
J Biotechnol. 2011 Jul 10;154(2-3):126-39. doi: 10.1016/j.jbiotec.2010.07.001. Epub 2010 Jul 8.
6
Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network.谷氨酸棒杆菌基因表达的转录调控:全局、主调控因子和局部调控因子在模块化和分层基因调控网络中的作用。
FEMS Microbiol Rev. 2010 Sep;34(5):685-737. doi: 10.1111/j.1574-6976.2010.00228.x. Epub 2010 Apr 14.
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Functional characterization of the glxR deletion mutant of Corynebacterium glutamicum ATCC 13032: involvement of GlxR in acetate metabolism and carbon catabolite repression.谷氨酸棒杆菌 ATCC 13032 的 glxR 缺失突变体的功能表征:GlxR 参与乙酸代谢和碳源分解代谢物阻遏。
FEMS Microbiol Lett. 2010 Mar;304(2):107-15. doi: 10.1111/j.1574-6968.2009.01884.x.
8
Engineering Corynebacterium glutamicum for isobutanol production.工程化谷氨酸棒杆菌生产异丁醇。
Appl Microbiol Biotechnol. 2010 Jul;87(3):1045-55. doi: 10.1007/s00253-010-2522-6. Epub 2010 Apr 8.
9
The GlxR regulon of the amino acid producer Corynebacterium glutamicum: Detection of the corynebacterial core regulon and integration into the transcriptional regulatory network model.谷氨酸棒杆菌 GlxR 调控组:检测棒杆菌核心调控组并将其整合到转录调控网络模型中。
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10
Transcriptional control of the succinate dehydrogenase operon sdhCAB of Corynebacterium glutamicum by the cAMP-dependent regulator GlxR and the LuxR-type regulator RamA.谷氨酸棒杆菌琥珀酸脱氢酶操纵子 sdhCAB 的转录调控受 cAMP 依赖性调节因子 GlxR 和 LuxR 型调节因子 RamA 的控制。
J Biotechnol. 2009 Sep 10;143(3):173-82. doi: 10.1016/j.jbiotec.2009.06.025. Epub 2009 Jul 5.

全局调控因子 GlxR、SugR 和 RamA 之间的调控相互作用对谷氨酸棒杆菌中 ramA 表达的影响。

Involvement of regulatory interactions among global regulators GlxR, SugR, and RamA in expression of ramA in Corynebacterium glutamicum.

机构信息

Research Institute of Innovative Technology for the Earth (RITE), Kizugawa, Kyoto, Japan.

出版信息

J Bacteriol. 2013 Apr;195(8):1718-26. doi: 10.1128/JB.00016-13. Epub 2013 Feb 8.

DOI:10.1128/JB.00016-13
PMID:23396909
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3624568/
Abstract

The central carbon metabolism genes in Corynebacterium glutamicum are under the control of a transcriptional regulatory network composed of several global regulators. It is known that the promoter region of ramA, encoding one of these regulators, interacts with its gene product, RamA, as well as with the two other regulators, GlxR and SugR, in vitro and/or in vivo. Although RamA has been confirmed to repress its own expression, the roles of GlxR and SugR in ramA expression have remained unclear. In this study, we examined the effects of GlxR binding site inactivation on expression of the ramA promoter-lacZ fusion in the genetic background of single and double deletion mutants of sugR and ramA. In the wild-type background, the ramA promoter activity was reduced to undetectable levels by the introduction of mutations into the GlxR binding site but increased by sugR deletion, indicating that GlxR and SugR function as the transcriptional activator and repressor, respectively. The marked repression of ramA promoter activity by the GlxR binding site mutations was largely compensated for by deletions of sugR and/or ramA. Furthermore, ramA promoter activity in the ramA-sugR double mutant was comparable to that in the ramA mutant but was significantly higher than that in the sugR mutant. Taken together, it is likely that the level of ramA expression is dynamically balanced by GlxR-dependent activation and repression by RamA along with SugR in response to perturbation of extracellular and/or intracellular conditions. These findings add multiple regulatory loops to the transcriptional regulatory network model in C. glutamicum.

摘要

谷氨酸棒杆菌的中心碳代谢基因受转录调控网络的控制,该网络由几个全局调控因子组成。已知编码这些调控因子之一的 ramA 的启动子区域在体外和/或体内与它的基因产物 RamA 以及另外两个调控因子 GlxR 和 SugR 相互作用。尽管已经证实 RamA 抑制自身表达,但 GlxR 和 SugR 在 ramA 表达中的作用仍不清楚。在本研究中,我们研究了 GlxR 结合位点失活对 sugR 和 ramA 单突变和双缺失突变遗传背景下 ramA 启动子-lacZ 融合表达的影响。在野生型背景下,GlxR 结合位点突变使 ramA 启动子活性降低到无法检测的水平,但 sugR 缺失增加了启动子活性,表明 GlxR 和 SugR 分别作为转录激活因子和抑制因子发挥作用。GlxR 结合位点突变对 ramA 启动子活性的显著抑制作用被 sugR 和/或 ramA 的缺失大大补偿。此外,ramA 启动子在 ramA-sugR 双突变体中的活性与 ramA 突变体相当,但明显高于 sugR 突变体。综上所述,ramA 的表达水平可能通过 GlxR 依赖的激活和 RamA 以及 SugR 的负调控来动态平衡,以响应细胞外和/或细胞内条件的变化。这些发现为谷氨酸棒杆菌的转录调控网络模型增加了多个调控回路。