Mass spectrometry of structurally modified DNA.
作者信息
Tretyakova Natalia, Villalta Peter W, Kotapati Srikanth
机构信息
Department of Medicinal Chemistry, University of Minnesota, Minneapolis, Minnesota 55455, USA.
出版信息
Chem Rev. 2013 Apr 10;113(4):2395-436. doi: 10.1021/cr300391r. Epub 2013 Feb 26.
Abstract
摘要
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本文引用的文献
1
Development of fast atom bombardment mass spectral methods for the identification of carcinogen-nucleoside adducts.
J Am Soc Mass Spectrom. 1992 May;3(4):360-71. doi: 10.1016/1044-0305(92)87064-6.
2
Tandem mass spectrometry of small, multiply charged oligonucleotides.
J Am Soc Mass Spectrom. 1992 Jan;3(1):60-70. doi: 10.1016/1044-0305(92)85019-G.
3
Structural Characterization of Normal and Modified Oligonucleotides by Matrix-assisted Laser Desorption Fourier Transform Mass Spectrometry.
J Am Soc Mass Spectrom. 1991 Sep;2(5):402-12. doi: 10.1016/1044-0305(91)85006-R.
4
Quantitation of SR 27417 in human plasma using electrospray liquid chromatography-tandem mass spectrometry: A study of ion suppression.
J Am Soc Mass Spectrom. 1996 Nov;7(11):1099-105. doi: 10.1016/S1044-0305(96)00072-4.
5
Translesion synthesis across 1,N6-(2-hydroxy-3-hydroxymethylpropan-1,3-diyl)-2'-deoxyadenosine (1,N6-γ-HMHP-dA) adducts by human and archebacterial DNA polymerases.
J Biol Chem. 2012 Nov 9;287(46):38800-11. doi: 10.1074/jbc.M112.396788. Epub 2012 Sep 13.
6
Substructure-based annotation of high-resolution multistage MS(n) spectral trees.
Rapid Commun Mass Spectrom. 2012 Oct 30;26(20):2461-71. doi: 10.1002/rcm.6364.
7
Targeted proteomic quantification on quadrupole-orbitrap mass spectrometer.
Mol Cell Proteomics. 2012 Dec;11(12):1709-23. doi: 10.1074/mcp.O112.019802. Epub 2012 Sep 7.
8
Recent developments in liquid chromatography-mass spectrometry and related techniques.
J Chromatogr A. 2012 Oct 12;1259:3-15. doi: 10.1016/j.chroma.2012.08.072. Epub 2012 Aug 31.
9
An approach based on ultra-high pressure liquid chromatography-tandem mass spectrometry to quantify O6-methyl and O6-carboxymethylguanine DNA adducts in intestinal cell lines.
J Chromatogr A. 2012 Sep 28;1257:25-33. doi: 10.1016/j.chroma.2012.07.040. Epub 2012 Jul 20.
10
Ultra-sensitive measurements of 11-Nor-δ(9)-tetrahydrocannabinol-9-carboxylic acid in oral fluid by microflow liquid chromatography-tandem mass spectrometry using a benchtop quadrupole/orbitrap mass spectrometer.
Anal Chem. 2012 Sep 18;84(18):7643-7. doi: 10.1021/ac3019476. Epub 2012 Aug 27.
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