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形式追随功能:A类黄素蛋白单加氧酶的结构与催化变异

Form follows function: structural and catalytic variation in the class a flavoprotein monooxygenases.

作者信息

Crozier-Reabe Karen, Moran Graham R

机构信息

Department of Chemistry and Biochemistry, University of Wisconsin-Milwaukee, 3210 N. Cramer Street, Milwaukee, Wisconsin 53211-3029, WI, USA.

出版信息

Int J Mol Sci. 2012 Nov 23;13(12):15601-39. doi: 10.3390/ijms131215601.

Abstract

Flavoprotein monooxygenases (FPMOs) exhibit an array of mechanistic solutions to a common chemical objective; the monooxygenation of a target substrate. Each FPMO efficiently couples reduction of a flavin cofactor by NAD(P)H to oxygenation of the target substrate via a (hydro)peroxyflavin intermediate. This purpose of this review is to describe in detail the Class A flavoprotein hydroxylases (FPMO) in the context of the other FPMO classes (B-F). Both one and two component FPMOs are found in nature. Two-component enzymes require, in addition to the monooxygenase, the involvement of a reductase that first catalyzes the reduction of the flavin by NAD(P)H. The Class A and B FPMOs are single-component and manage to orchestrate the same net reaction within a single peptide. The Class A enzymes have, by some considerable margin, the most complete research record. These enzymes use choreographed movements of the flavin ring that facilitate access of the organic substrates to the active site, provide a means for interaction of NADPH with the flavin, offer a mechanism to sequester the dioxygen reduction chemistry from solvent and a means to release the product. The majority of the discrete catalytic events of the catalytic cycle can be observed directly in exquisite detail using spectrophotometric kinetic methods and many of the key mechanistic conclusions are further supported by structural data. This review attempts to compile each of the key observations made for both paradigm and newly discovered examples of Class A FPMOs into a complete catalytic description of one enzymatic turnover.

摘要

黄素蛋白单加氧酶(FPMOs)针对一个共同的化学目标展现出一系列的作用机制;即靶底物的单加氧反应。每种FPMO都能有效地将NAD(P)H对黄素辅因子的还原作用与通过(氢)过氧黄素中间体对靶底物的氧化作用偶联起来。本综述的目的是在其他FPMO类别(B - F)的背景下详细描述A类黄素蛋白羟化酶(FPMO)。自然界中存在单组分和双组分的FPMOs。双组分酶除了单加氧酶外,还需要一种还原酶的参与,该还原酶首先催化NAD(P)H对黄素的还原。A类和B类FPMOs是单组分的,并且能够在单一肽段内协调相同的净反应。A类酶在相当程度上拥有最完整的研究记录。这些酶利用黄素环的精心编排的运动,促进有机底物进入活性位点,为NADPH与黄素的相互作用提供一种方式,提供一种将双氧还原化学过程与溶剂隔离的机制以及一种释放产物的方式。使用分光光度动力学方法可以直接极其详细地观察到催化循环中大多数离散的催化事件,并且许多关键的作用机制结论得到了结构数据的进一步支持。本综述试图将针对A类FPMOs的范例和新发现实例所做的每一项关键观察结果汇编成一个完整的关于一个酶促周转的催化描述。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e05b/3546652/39946194ef6e/ijms-13-15601f1.jpg

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