Alfred Wegener Institute for Polar and Marine Research, Research Department Potsdam, Germany.
University of Tromsø, Department for Arctic and Marine Biology, Tromsø, Norway.
Int J Syst Evol Microbiol. 2013 Sep;63(Pt 9):3197-3203. doi: 10.1099/ijs.0.046920-0. Epub 2013 Mar 1.
A novel psychrotolerant, Gram-negative, shiny white, curved-rod-shaped, facultatively anaerobic bacterium PB1(T) was isolated from a soil sample collected from a glacier forefield of the Larsemann Hills, East Antarctica. Isolate PB1(T) has catalase and low urease activity and hydrolyses gelatin and starch. Strain PB1(T) is able to grow between -5 °C and 30 °C with optimum growth at 14-20 °C. Glycerol, dl-arabinose, d-xylose, d-galactose, d-fructose, d-lyxose, d-fucose and potassium gluconate are used as sole carbon sources. The major quinone is ubiquinone Q-8. The major fatty acids (>10%) for PB1(T) are C(16:0) (19.1%), C(16:1)ω7cis (44.6%) and C(18:1)ω7cis (16.2%). The major polyamines are putrescine [54.9 µmol (g dry weight)(-1)] and 2-hydroxy putrescine [18.5 µmol (g dry weight)(-1)]. DNA G+C content is 62.5 mol%. Strain PB1(T) is phylogenetically related to species of the genus Herbaspirillum, with highest 16S rRNA gene sequence similarities to Herbaspirillum canariense (97.3%), Herbaspirillum aurantiacum (97.2%), Herbaspirillum soli (97.2%) and Herbaspirillum frisingense (97.0%). The DNA-DNA relatedness values were below 30% between PB1(T) and the type strains of Herbaspirillum canariense, Herbaspirillum aurantiacum and Herbaspirillum soli. The different geographical origin of strain PB1(T) from its closest phylogenetic relatives resulted in different phenotypic and genotypic specifications, whereby strain PB(T) represents a novel species of the genus Herbaspirillum, for which the name Herbaspirillum psychrotolerans is proposed. The type strain is PB1(T) (DSM 26001(T) =LMG 27282(T)).
一株新的耐冷、革兰氏阴性、闪亮白色、弯曲杆状、兼性厌氧细菌 PB1(T) 是从东南极拉森冰架前的一个土壤样本中分离出来的。分离株 PB1(T) 具有过氧化氢酶和低脲酶活性,能水解明胶和淀粉。菌株 PB1(T) 能在-5°C 到 30°C 之间生长,最适生长温度为 14-20°C。甘油、dl-阿拉伯糖、d-木糖、d-半乳糖、d-果糖、d-木酮糖、d-岩藻糖和葡萄糖酸钾可用作唯一的碳源。主要的醌类是泛醌 Q-8。PB1(T) 的主要脂肪酸 (>10%)为 C(16:0) (19.1%)、C(16:1)ω7cis (44.6%)和 C(18:1)ω7cis (16.2%)。主要的多胺是腐胺[54.9 µmol (g 干重)(-1)]和 2-羟腐胺[18.5 µmol (g 干重)(-1)]。DNA G+C 含量为 62.5 mol%。菌株 PB1(T) 在系统发育上与 Herbaspirillum 属的种有关,与 Herbaspirillum canariense (97.3%)、Herbaspirillum aurantiacum (97.2%)、Herbaspirillum soli (97.2%)和 Herbaspirillum frisingense (97.0%)的 16S rRNA 基因序列相似度最高。PB1(T) 与 Herbaspirillum canariense、Herbaspirillum aurantiacum 和 Herbaspirillum soli 的模式菌株之间的 DNA-DNA 同源性值低于 30%。由于 PB1(T) 与最接近的系统发育亲缘关系菌株的不同地理位置,导致了不同的表型和基因型特征,因此菌株 PB(T) 代表了 Herbaspirillum 属的一个新种,建议将其命名为 Herbaspirillum psychrotolerans。模式菌株为 PB1(T) (DSM 26001(T) =LMG 27282(T))。