Condensed Matter Physics Department, Jožef Stefan Institute, Ljubljana, Slovenia.
Biophys J. 2013 Mar 5;104(5):1181-90. doi: 10.1016/j.bpj.2013.01.029.
A microscale mathematical model of blood clot dissolution based on coarse-grained molecular dynamics is presented. In the model, a blood clot is assumed to be an assembly of blood cells interconnected with elastic fibrin bonds, which are cleaved either biochemically (bond degradation) or mechanically (bond overstretching) during flow-mediated thrombolysis. The effect of a thrombolytic agent on biochemical bond degradation was modeled phenomenologically by assuming that the decay rate of an individual bond is a function of the remaining noncleaved bonds in the vicinity of that bond (spatial corrosion) and the relative stretching of the bond (deformational corrosion). The results of simulations indicate that the blood clot dissolution process progresses by a blood-flow-promoted removal of clot fragments, the sizes of which are flow-dependent. These findings are in good agreement with the results of our recent optical-microscopy experimental studies on a model of blood clot dissolution, as well as with clinical observations. The findings of this study may contribute to a better understanding of the clot fragmentation process and may therefore also help in designing new, safer thrombolytic approaches.
提出了一种基于粗粒分子动力学的血液凝块溶解的微观数学模型。在该模型中,血液凝块被假设为由相互连接的弹性纤维蛋白键的血细胞组装而成,这些键在流动介导的溶栓过程中通过生化(键降解)或机械(键过度拉伸)方式被切割。通过假设单个键的衰减速率是该键附近剩余未切割键的函数(空间腐蚀)和键的相对拉伸(变形腐蚀),对溶栓剂对生化键降解的影响进行了现象学建模。模拟结果表明,血液凝块溶解过程通过血流促进的凝块碎片的去除进行,其大小取决于血流。这些发现与我们最近在血液凝块溶解模型的光学显微镜实验研究以及临床观察结果非常吻合。这项研究的结果可能有助于更好地理解凝块碎裂过程,因此也有助于设计新的、更安全的溶栓方法。