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与受损和健康的 Fungiidae 珊瑚相关的细菌群落存在主要相似性。

Major similarities in the bacterial communities associated with lesioned and healthy Fungiidae corals.

机构信息

Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.

出版信息

Environ Microbiol. 2013 Jul;15(7):2063-72. doi: 10.1111/1462-2920.12107. Epub 2013 Mar 21.

DOI:10.1111/1462-2920.12107
PMID:23516962
Abstract

Cultivation-based studies have demonstrated that yellow-band disease (YBD), a lesion-producing ailment affecting diverse species of coral, is caused by a consortium of Vibrio spp. This study takes the first cultivation-independent approach to examine the whole bacterial community associated with YBD-like lesioned corals. Two species of Fungiidae corals, Ctenactis crassa and Herpolitha limax, displaying YBD-like lesions were examined across diverse reefs throughout the Red Sea. Using a pyrosequencing approach targeting the V1-V3 regions of the SSU rRNA gene, no major differences in bacterial community composition or diversity were identified between healthy and lesioned corals of either species. Indicator species analysis did not find Vibrio significantly associated with the lesioned corals. However, operational taxonomic units belonging to the Ruegeria genus of Alphaproteobacteria and NS9 marine group of Flavobacteria were significantly associated with the lesioned corals. The most striking trend of this dataset was that reef location was found to be the most significant influence on the coral-bacterial community. It is possible that more pronounced lesion-specific bacterial signatures might have been concealed by the strong influence of environmental conditions on coral-bacteria. Overall, this study demonstrates inconsistencies between cultivation-independent and cultivation-based studies regarding the role of specific bacteria in coral diseases.

摘要

基于培养的研究表明,黄带病(YBD)是一种影响多种珊瑚物种的致病疾病,是由一系列弧菌属细菌引起的。本研究首次采用非培养依赖性方法来研究与 YBD 样病变珊瑚相关的整个细菌群落。对显示出 YBD 样病变的两种真菌珊瑚,Ctenactis crassa 和 Herpolitha limax,在红海不同的珊瑚礁中进行了检查。使用靶向 SSU rRNA 基因 V1-V3 区的焦磷酸测序方法,在两种珊瑚的健康和病变样本之间,未发现细菌群落组成或多样性有显著差异。指示物种分析并未发现弧菌与病变珊瑚有显著关联。然而, Ruegeria 属的α变形菌和 NS9 海洋群的 Flavobacteria 归属于操作分类单元与病变珊瑚显著相关。该数据集最显著的趋势是,发现珊瑚礁位置是影响珊瑚-细菌群落的最显著因素。病变特异性细菌特征可能被环境条件对珊瑚-细菌的强烈影响所掩盖。总体而言,本研究表明,在特定细菌在珊瑚疾病中的作用方面,非培养依赖性和基于培养的研究之间存在不一致。

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