Institute of Groundwater Ecology, Helmholtz Zentrum München, German Research Center for Environmental Health, Ingolstädter Landstr. 1, D-85764, Neuherberg, Germany.
Environ Microbiol Rep. 2013 Apr;5(2):225-34. doi: 10.1111/1758-2229.12004. Epub 2012 Nov 4.
Hydrocarbon contaminants in groundwater can be degraded by microbes under different redox settings, forming hot spots of degradation especially at the fringes of contaminant plumes. At a tar-oil-contaminated aquifer in Germany, it was previously shown that the distribution of anaerobic toluene degraders as traced via catabolic and ribosomal marker genes is highly correlated to zones of increased anaerobic degradation at the lower fringe of the plume. Here, we trace the respective distribution of aerobic toluene degraders over a fine-scale depth transect of sediments taken at the upper fringe of the plume and below, based on the analysis of 16S rRNA genes as well as catabolic markers in intervals of 3-10 cm. Well-defined small-scale distribution maxima of typical aerobic degrader lineages within the Pseudomonadaceae, Comamonadaceae and Burkholderiaceae are revealed over the redox gradient. An unexpected maximal abundance of 9.2 × 10⁶ toluene monooxygenase (tmoA) genes per g of sediment was detected in the strongly reduced plume core, and gene counts did not increase towards the more oxidized upper plume fringe. This may point towards unusual ecological controls of these yet unidentified aerobic degraders, and indicates that competitive niche partitioning between aerobic and anaerobic hydrocarbon degraders in the field is not yet fully understood. These findings demonstrate the potential of catabolic marker gene assays in elaborating the ecology of contaminant plumes, which is a prerequisite for developing integrated monitoring strategies for natural attenuation.
地下水的碳氢化合物污染物可以在不同的氧化还原环境下被微生物降解,形成降解热点,特别是在污染物羽流的边缘。在德国一个焦油污染的含水层中,先前的研究表明,追踪厌氧甲苯降解菌的代谢和核糖体标记基因的分布与羽流下部边缘的厌氧降解增强区高度相关。在这里,我们基于 16S rRNA 基因和间隔 3-10cm 的代谢标记物分析,在羽流的上部边缘和下部边缘的沉积物精细深度剖面上追踪好氧甲苯降解菌的分布。在氧化还原梯度上,揭示了假单胞菌科、丛毛单胞菌科和伯克霍尔德菌科中典型好氧降解菌系的明确的小规模分布最大值。在强烈还原的羽流核心中,检测到每克沉积物中甲苯单加氧酶(tmoA)基因的丰度高达 9.2×10⁶,而基因计数并没有向更氧化的羽流上部边缘增加。这可能表明这些尚未鉴定的好氧降解菌受到了不同寻常的生态控制,并表明在现场,好氧和厌氧烃降解菌之间的竞争生态位分异尚未得到充分理解。这些发现证明了代谢标记基因分析在阐述污染物羽流生态学方面的潜力,这是开发自然衰减综合监测策略的前提。