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本文引用的文献

1
Analysis of HRCT-derived xylem network reveals reverse flow in some vessels.基于 HRCT 的木质部网络分析显示,一些导管中存在逆流现象。
J Theor Biol. 2013 Sep 21;333:146-55. doi: 10.1016/j.jtbi.2013.05.021. Epub 2013 Jun 4.
2
Xylem vessel relays contribute to radial connectivity in grapevine stems (Vitis vinifera and V. arizonica; Vitaceae).木质部导管连接有助于葡萄茎(Vitis vinifera 和 V. arizonica;葡萄科)的径向连通性。
Am J Bot. 2013 Feb;100(2):314-21. doi: 10.3732/ajb.1100606. Epub 2013 Jan 23.
3
Centrifuge technique consistently overestimates vulnerability to water stress-induced cavitation in grapevines as confirmed with high-resolution computed tomography.正如高分辨率计算机断层扫描所证实的那样,离心技术一直高估了葡萄树对水分胁迫诱导空化的脆弱性。
New Phytol. 2012 Nov;196(3):661-665. doi: 10.1111/j.1469-8137.2012.04244.x. Epub 2012 Jul 16.
4
The physiological implications of primary xylem organization in two ferns.两种蕨类植物初生木质部组织的生理学意义。
Plant Cell Environ. 2012 Nov;35(11):1898-911. doi: 10.1111/j.1365-3040.2012.02524.x. Epub 2012 May 22.
5
Automated analysis of three-dimensional xylem networks using high-resolution computed tomography.利用高分辨率计算机断层扫描技术对三维木质部网络进行自动分析。
New Phytol. 2011 Sep;191(4):1168-1179. doi: 10.1111/j.1469-8137.2011.03754.x. Epub 2011 May 13.
6
The dynamics of embolism repair in xylem: in vivo visualizations using high-resolution computed tomography.木质部栓塞修复的动力学:使用高分辨率计算机断层扫描进行体内可视化。
Plant Physiol. 2010 Nov;154(3):1088-95. doi: 10.1104/pp.110.162396. Epub 2010 Sep 14.
7
The role of tyloses in crown hydraulic failure of mature walnut trees afflicted by apoplexy disorder.栓塞在患中风紊乱的成熟核桃树冠水力失效中的作用。
Tree Physiol. 2010 Jun;30(6):761-72. doi: 10.1093/treephys/tpq026. Epub 2010 May 6.
8
Micron-scale 3D imaging of wood and plant microstructure using high-resolution X-ray phase-contrast microtomography.使用高分辨率 X 射线相衬显微断层摄影术对木材和植物微观结构进行微米级 3D 成像。
J Struct Biol. 2010 Aug;171(2):182-8. doi: 10.1016/j.jsb.2010.04.001. Epub 2010 Apr 9.
9
Imaging and analysis platform for automatic phenotyping and trait ranking of plant root systems.植物根系自动表型分析和性状分级的成像和分析平台。
Plant Physiol. 2010 Mar;152(3):1148-57. doi: 10.1104/pp.109.150748. Epub 2010 Jan 27.
10
Combined MRI-PET dissects dynamic changes in plant structures and functions.磁共振成像与正电子发射断层扫描相结合的技术剖析了植物结构和功能的动态变化。
Plant J. 2009 Aug;59(4):634-44. doi: 10.1111/j.1365-313X.2009.03888.x. Epub 2009 Apr 6.

使用高分辨率计算机断层扫描来可视化植物脉管系统的三维结构和功能。

Using high resolution computed tomography to visualize the three dimensional structure and function of plant vasculature.

作者信息

McElrone Andrew J, Choat Brendan, Parkinson Dilworth Y, MacDowell Alastair A, Brodersen Craig R

机构信息

U.S. Department of Agriculture, USA.

出版信息

J Vis Exp. 2013 Apr 5(74):50162. doi: 10.3791/50162.

DOI:10.3791/50162
PMID:23609036
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3643333/
Abstract

High resolution x-ray computed tomography (HRCT) is a non-destructive diagnostic imaging technique with sub-micron resolution capability that is now being used to evaluate the structure and function of plant xylem network in three dimensions (3D) (e.g. Brodersen et al. 2010; 2011; 2012a,b). HRCT imaging is based on the same principles as medical CT systems, but a high intensity synchrotron x-ray source results in higher spatial resolution and decreased image acquisition time. Here, we demonstrate in detail how synchrotron-based HRCT (performed at the Advanced Light Source-LBNL Berkeley, CA, USA) in combination with Avizo software (VSG Inc., Burlington, MA, USA) is being used to explore plant xylem in excised tissue and living plants. This new imaging tool allows users to move beyond traditional static, 2D light or electron micrographs and study samples using virtual serial sections in any plane. An infinite number of slices in any orientation can be made on the same sample, a feature that is physically impossible using traditional microscopy methods. Results demonstrate that HRCT can be applied to both herbaceous and woody plant species, and a range of plant organs (i.e. leaves, petioles, stems, trunks, roots). Figures presented here help demonstrate both a range of representative plant vascular anatomy and the type of detail extracted from HRCT datasets, including scans for coast redwood (Sequoia sempervirens), walnut (Juglans spp.), oak (Quercus spp.), and maple (Acer spp.) tree saplings to sunflowers (Helianthus annuus), grapevines (Vitis spp.), and ferns (Pteridium aquilinum and Woodwardia fimbriata). Excised and dried samples from woody species are easiest to scan and typically yield the best images. However, recent improvements (i.e. more rapid scans and sample stabilization) have made it possible to use this visualization technique on green tissues (e.g. petioles) and in living plants. On occasion some shrinkage of hydrated green plant tissues will cause images to blur and methods to avoid these issues are described. These recent advances with HRCT provide promising new insights into plant vascular function.

摘要

高分辨率X射线计算机断层扫描(HRCT)是一种具有亚微米分辨率能力的非破坏性诊断成像技术,目前正用于三维(3D)评估植物木质部网络的结构和功能(例如Brodersen等人,2010年;2011年;2012a,b)。HRCT成像基于与医学CT系统相同的原理,但高强度同步加速器X射线源可实现更高的空间分辨率并缩短图像采集时间。在此,我们详细展示了基于同步加速器的HRCT(在美国加利福尼亚州伯克利市劳伦斯伯克利国家实验室的先进光源进行)与Avizo软件(美国马萨诸塞州伯灵顿市VSG公司)相结合,如何用于探索离体组织和活体植物中的植物木质部。这种新的成像工具使用户能够超越传统的静态二维光学或电子显微照片,使用任意平面的虚拟连续切片来研究样本。可以在同一样本上制作任意方向的无数切片,这是传统显微镜方法在物理上无法实现的功能。结果表明,HRCT可应用于草本和木本植物物种以及一系列植物器官(即叶子、叶柄、茎、树干、根)。此处展示的图片有助于说明一系列具有代表性的植物维管解剖结构以及从HRCT数据集中提取的细节类型,包括对海岸红杉(北美红杉)、核桃(胡桃属物种)、橡树(栎属物种)和枫树(槭属物种)树苗到向日葵(向日葵)、葡萄藤(葡萄属物种)以及蕨类植物(欧洲蕨和条纹乌毛蕨)的扫描。木本物种的离体干燥样本最易于扫描,通常能产生最佳图像。然而,最近的改进(即更快的扫描和样本稳定)使得在绿色组织(如叶柄)和活体植物上使用这种可视化技术成为可能。偶尔,水合绿色植物组织的一些收缩会导致图像模糊,本文描述了避免这些问题的方法。HRCT的这些最新进展为植物维管功能提供了有前景的新见解。