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ORFV 环介导等温扩增与实时荧光定量 PCR 的比较。

Comparison of a loop-mediated isothermal amplification for orf virus with quantitative real-time PCR.

机构信息

State Key Laboratory of Veterinary Etiological Biology, Lanzhou 730046, China.

出版信息

Virol J. 2013 May 1;10:138. doi: 10.1186/1743-422X-10-138.

Abstract

BACKGROUND

Orf virus (ORFV) causes orf (also known as contagious ecthyma or contagious papular dermatitis), a severe infectious skin disease in goats, sheep and other ruminants. Therefore, a rapid, highly specific and accurate method for the diagnosis of ORFV infections is essential to ensure that the appropriate treatments are administered and to reduce economic losses.

METHODS

A loop-mediated isothermal amplification (LAMP) assay based on the identification of the F1L gene was developed for the specific detection of ORFV infections. The sensitivity and specificity of the LAMP assay were evaluated, and the effectiveness of this method was compared with that of real-time PCR.

RESULTS

The sensitivity of this assay was determined to be 10 copies of a standard plasmid. Furthermore, no cross-reactivity was found with either capripox virus or FMDV. The LAMP and real-time PCR assays were both able to detect intracutaneous- and cohabitation-infection samples, with a concordance of 97.83%. LAMP demonstrated a sensitivity of 89.13%.

CONCLUSION

The LAMP assay is a highly efficient and practical method for detecting ORFV infection. This LAMP method shows great potential for monitoring the prevalence of orf, and it could prove to be a powerful supplemental tool for current diagnostic methods.

摘要

背景

口疮病毒(ORFV)可引起口疮(也称为接触传染性脓疱性皮炎或传染性丘疹性皮炎),这是山羊、绵羊和其他反刍动物的一种严重传染性皮肤疾病。因此,快速、高度特异和准确的 ORFV 感染诊断方法对于确保实施适当的治疗和减少经济损失至关重要。

方法

本研究基于 F1L 基因的鉴定,开发了一种环介导等温扩增(LAMP)检测方法,用于特异性检测 ORFV 感染。评估了 LAMP 检测方法的灵敏度和特异性,并将该方法的有效性与实时 PCR 进行了比较。

结果

该检测方法的灵敏度确定为 10 个标准质粒拷贝。此外,与羊痘病毒或口蹄疫病毒均无交叉反应。LAMP 和实时 PCR 检测方法均可检测到皮内和同居感染样本,一致性为 97.83%。LAMP 的灵敏度为 89.13%。

结论

LAMP 检测方法是一种高效实用的 ORFV 感染检测方法。该 LAMP 方法对于监测口疮的流行具有很大的潜力,并且可以成为当前诊断方法的有力补充工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/3651318/b79c60f51cae/1743-422X-10-138-1.jpg

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