Department of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
J Virol. 2013 Jul;87(13):7558-68. doi: 10.1128/JVI.00653-13. Epub 2013 May 1.
The phosphoprotein (P) is virally encoded by the Rhabdoviridae and Paramyxoviridae in the order Mononegavirales. P is a self-associated oligomer and forms complexes with the large viral polymerase protein (L), the nucleocapsid protein (N), and the assembled nucleocapsid. P from different viruses has shown structural diversities even though their essential functions are the same. We systematically mapped the domains in mumps virus (MuV) P and investigated their interactions with nucleocapsid-like particles (NLPs). Similar to other P proteins, MuV P contains N-terminal, central, and C-terminal domains with flexible linkers between neighboring domains. By pulldown assays, we discovered that in addition to the previously proposed nucleocapsid binding domain (residues 343 to 391), the N-terminal region of MuV P (residues 1 to 194) could also bind NLPs. Further analysis of binding kinetics was conducted using surface plasmon resonance. This is the first observation that both the N- and C-terminal regions of a negative-strand RNA virus P are involved in binding the nucleocapsid. In addition, we defined the oligomerization domain (POD) of MuV P as residues 213 to 277 and determined its crystal structure. The tetrameric MuV POD is formed by one pair of long parallel α-helices with another pair in opposite orientation. Unlike the parallel orientation of each α-helix in the tetramer of Sendai virus POD, this represents a novel orientation of a POD where both the N- and the C-terminal domains are at either end of the tetramer. This is consistent with the observation that both the N- and the C-terminal domains are involved in binding the nucleocapsid.
磷蛋白(P)是单负链病毒目(Mononegavirales)的弹状病毒科(Rhabdoviridae)和副黏病毒科(Paramyxoviridae)病毒编码的病毒蛋白。P 是一种自我关联的寡聚物,与大型病毒聚合酶蛋白(L)、核衣壳蛋白(N)和组装的核衣壳形成复合物。尽管它们的基本功能相同,但来自不同病毒的 P 蛋白表现出结构多样性。我们系统地绘制了腮腺炎病毒(MuV)P 中的结构域,并研究了它们与核衣壳样颗粒(NLP)的相互作用。与其他 P 蛋白一样,MuV P 包含 N 端、中央和 C 端结构域,相邻结构域之间有柔性连接。通过下拉测定,我们发现除了先前提出的核衣壳结合结构域(残基 343 至 391)外,MuV P 的 N 端区域(残基 1 至 194)也可以与 NLP 结合。使用表面等离子体共振进一步分析了结合动力学。这是首次观察到负链 RNA 病毒 P 的 N 和 C 端区域都参与与核衣壳的结合。此外,我们将 MuV P 的寡聚结构域(POD)定义为残基 213 至 277,并确定了其晶体结构。四聚体 MuV POD 由一对平行的长α-螺旋组成,另一对则呈相反方向。与 Sendai 病毒 POD 四聚体中每个α-螺旋的平行取向不同,这代表了一种新的 POD 取向,其中 N 和 C 端结构域分别位于四聚体的两端。这与 N 和 C 端结构域都参与与核衣壳结合的观察结果一致。