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纤维素分解菌 Streptomyces sp. SirexAA-E 中一种新型分泌酶的加氧酶和木质素结合结构域融合

Fusion of dioxygenase and lignin-binding domains in a novel secreted enzyme from cellulolytic Streptomyces sp. SirexAA-E.

机构信息

Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, Wisconsin, 53706, USA.

出版信息

J Biol Chem. 2013 Jun 21;288(25):18574-87. doi: 10.1074/jbc.M113.475848. Epub 2013 May 7.

Abstract

Streptomyces sp. SirexAA-E is a highly cellulolytic bacterium isolated from an insect/microbe symbiotic community. When grown on lignin-containing biomass, it secretes SACTE_2871, an aromatic ring dioxygenase domain fused to a family 5/12 carbohydrate-binding module (CBM 5/12). Here we present structural and catalytic studies of this novel fusion enzyme, thus providing insight into its function. The dioxygenase domain has the core β-sandwich fold typical of this enzyme family but lacks a dimerization domain observed in other intradiol dioxygenases. Consequently, the x-ray structure shows that the enzyme is monomeric and the Fe(III)-containing active site is exposed to solvent in a shallow depression on a planar surface. Purified SACTE_2871 catalyzes the O2-dependent intradiol cleavage of catechyl compounds from lignin biosynthetic pathways, but not their methylated derivatives. Binding studies show that SACTE_2871 binds synthetic lignin polymers and chitin through the interactions of the CBM 5/12 domain, representing a new binding specificity for this fold-family. Based on its unique structural features and functional properties, we propose that SACTE_2871 contributes to the invasive nature of the insect/microbial community by destroying precursors needed by the plant for de novo lignin biosynthesis as part of its natural wounding response.

摘要

链霉菌 sp. SirexAA-E 是一种从昆虫/微生物共生群落中分离出来的高度纤维素分解菌。当在含有木质素的生物质上生长时,它会分泌 SACTE_2871,这是一种芳香环双加氧酶结构域与家族 5/12 碳水化合物结合模块(CBM 5/12)融合的酶。在这里,我们对这种新型融合酶进行了结构和催化研究,从而深入了解其功能。该双加氧酶结构域具有该酶家族典型的核心 β-夹心折叠结构,但缺乏其他邻二醇双加氧酶中观察到的二聚化结构域。因此,X 射线结构表明该酶是单体,并且含有 Fe(III)的活性位点暴露在平面表面上的浅凹陷中。纯化的 SACTE_2871 可催化木质素生物合成途径中儿茶酚化合物的 O2 依赖性邻二醇裂解,但不能催化其甲基化衍生物。结合研究表明,SACTE_2871 通过 CBM 5/12 结构域的相互作用与合成木质素聚合物和几丁质结合,代表了该折叠家族的新结合特异性。基于其独特的结构特征和功能特性,我们提出 SACTE_2871 通过破坏植物用于从头合成木质素所需的前体,作为其天然创伤反应的一部分,有助于昆虫/微生物群落的侵袭性。

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