Department of Mathematics, University of Auckland, Auckland, New Zealand.
PLoS One. 2013 May 6;8(5):e57640. doi: 10.1371/journal.pone.0057640. Print 2013.
Recently, there has been much interest in describing the behaviour of animals by fitting various movement models to tracking data. Despite this interest, little is known about how the temporal 'grain' of movement trajectories affects the outputs of such models, and how behaviours classified at one timescale may differ from those classified at other scales. Here, we present a study in which random-walk state-space models were fit both to nightly geospatial lifelines of common brushtail possums (Trichosurus vulpecula) and synthetic trajectories parameterised from empirical observations. Observed trajectories recorded by GPS collars at 5-min intervals were sub-sampled at periods varying between 10 and 60 min, to approximate the effect of collecting data at lower sampling frequencies. Markov-Chain Monte-Carlo fitting techniques, using information about movement rates and turning angles between sequential fixes, were employed using a Bayesian framework to assign distinct behavioural states to individual location estimates. We found that in trajectories with higher temporal granularities behaviours could be clearly differentiated into 'slow-area-restricted' and 'fast-transiting' states, but for trajectories with longer inter-fix intervals this distinction was markedly less obvious. Specifically, turning-angle distributions varied from being highly peaked around either 0° or 180° at fine temporal scales, to being uniform across all angles at low sampling intervals. Our results highlight the difficulty of comparing model results amongst tracking-data sets that vary substantially in temporal grain, and demonstrate the importance of matching the observed temporal resolution of tracking devices to the timescales of behaviours of interest, otherwise inter-individual comparisons of inferred behaviours may be invalid, or important biological information may be obscured.
最近,人们对通过将各种运动模型拟合到跟踪数据来描述动物行为产生了浓厚的兴趣。尽管对此很感兴趣,但人们对运动轨迹的时间“粒度”如何影响这些模型的输出以及在一个时间尺度上分类的行为如何与在其他尺度上分类的行为不同知之甚少。在这里,我们进行了一项研究,其中随机游走状态空间模型既拟合了常见刷尾负鼠(Trichosurus vulpecula)的夜间地理轨迹,也拟合了从经验观测中参数化的合成轨迹。使用 GPS 项圈以 5 分钟的间隔记录的观测轨迹以 10 到 60 分钟之间的时间段进行了子采样,以近似于以较低采样频率收集数据的效果。使用贝叶斯框架的马尔可夫链蒙特卡罗拟合技术,利用运动速度和连续定位点之间的转角信息,将个体位置估计值分配给不同的行为状态。我们发现,在时间粒度较高的轨迹中,可以清楚地将行为区分成“慢区域限制”和“快速转移”状态,但对于间隔时间较长的轨迹,这种区分明显不那么明显。具体来说,在精细的时间尺度下,转角分布高度集中在 0°或 180°左右,而在低采样间隔下,转角分布在所有角度上均匀分布。我们的结果强调了在时间粒度差异较大的跟踪数据集之间比较模型结果的困难,并说明了将观察到的跟踪设备的时间分辨率与感兴趣的行为的时间尺度相匹配的重要性,否则推断出的行为的个体间比较可能无效,或者可能会掩盖重要的生物学信息。