Microbial Oceanography Laboratory, School of Earth and Environmental Sciences, and Research Institute of Oceanography, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 151-742, Republic of Korea.
Marine Biotechnology Research Division, Korea Institute of Ocean Science and Technology, Ansan 426-744, Republic of Korea.
Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):4006-4011. doi: 10.1099/ijs.0.052340-0. Epub 2013 May 24.
A Gram-staining-negative, non-motile, spore-forming, rod-shaped, marine bacterial strain, CL-KR2(T), was isolated from tropical seawater near Kosrae, an island in the Federated States of Micronesia. Analysis of the 16S rRNA gene sequence of strain CL-KR2(T) revealed a clear affiliation with the genus Gracilimonas. Based on phylogenetic analysis, strain CL-KR2(T) showed the closest phylogenetic relationship to Gracilimonas tropica CL-CB462(T), with 16S rRNA gene sequence similarity of 96.6 %. DNA-DNA relatedness between strain CL-KR2(T) and G. tropica CL-CB462(T) was 6.7 % (reciprocal 9.5 %). Strain CL-KR2(T) grew in the presence of 1-20 % sea salts and the optimal salt concentration was 3.5-5 %. The temperature and pH optima for growth were 35 °C and pH 7.5. The major cellular fatty acids (≥10.0 %) of strain CL-KR2(T) were iso-C15 : 0, summed feature 3 (iso-C15 : 0 2-OH and/or C16 : 1ω7c) and iso-C17 : 1ω9c and the only isoprenoid quinone was MK-7. The polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, an unidentified phospholipid, two unidentified glycolipids and two unidentified lipids. The genomic DNA G+C content of strain CL-KR2(T) was 43.2 mol%. The combined phenotypic, chemotaxonomic and phylogenetic data showed that strain CL-KR2(T) could be distinguished from the only member of the genus Gracilimonas with a validly published name. Thus, strain CL-KR2(T) should be assigned to a novel species in the genus Gracilimonas, for which the name Gracilimonas rosea sp. nov. is proposed. The type strain is CL-KR2(T) ( = KCCM 90206(T) = JCM 18898(T)).
一株革兰氏阴性、非运动、产孢、杆状、海洋细菌菌株 CL-KR2(T),从密克罗尼西亚联邦的科斯雷岛附近的热带海水中分离得到。对菌株 CL-KR2(T)的 16S rRNA 基因序列分析表明,它与 Gracilimonas 属有明显的亲缘关系。基于系统发育分析,菌株 CL-KR2(T)与 Gracilimonas tropica CL-CB462(T)的亲缘关系最为密切,16S rRNA 基因序列相似性为 96.6%。菌株 CL-KR2(T)与 G. tropica CL-CB462(T)之间的 DNA-DNA 同源性为 6.7%(相互为 9.5%)。菌株 CL-KR2(T)在 1-20%盐度的海水中生长,最适盐度为 3.5-5%。生长的最适温度和 pH 值分别为 35°C 和 pH 7.5。菌株 CL-KR2(T)的主要细胞脂肪酸(≥10.0%)为 iso-C15:0、summed feature 3(iso-C15:0 2-OH 和/或 C16:1ω7c)和 iso-C17:1ω9c,唯一的异戊烯醌为 MK-7。极性脂为双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油、一种未鉴定的磷脂、两种未鉴定的糖脂和两种未鉴定的脂类。菌株 CL-KR2(T)的基因组 DNA G+C 含量为 43.2mol%。综合表型、化学分类和系统发育数据表明,菌株 CL-KR2(T)与具有有效发表名称的 Gracilimonas 属中唯一的成员可明显区分开来。因此,菌株 CL-KR2(T)应归属于 Gracilimonas 属中的一个新种,建议将其命名为 Gracilimonas rosea sp. nov.。模式菌株为 CL-KR2(T)(=KCCM 90206(T)=JCM 18898(T))。