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本文引用的文献

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Accurate measurements of dynamics and reproducibility in small genetic networks.准确测量小型遗传网络中的动态性和可重复性。
Mol Syst Biol. 2013;9:639. doi: 10.1038/msb.2012.72.
2
Frequency-modulated pulses of ERK activity transmit quantitative proliferation signals.ERK 活性的调频脉冲传递定量的增殖信号。
Mol Cell. 2013 Jan 24;49(2):249-61. doi: 10.1016/j.molcel.2012.11.002. Epub 2012 Dec 6.
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MAP kinase signalling cascades and transcriptional regulation.丝裂原活化蛋白激酶信号转导通路和转录调控。
Gene. 2013 Jan 15;513(1):1-13. doi: 10.1016/j.gene.2012.10.033. Epub 2012 Nov 1.
4
Torso RTK controls Capicua degradation by changing its subcellular localization.躯干 RTK 通过改变其亚细胞定位来控制 Capicua 的降解。
Development. 2012 Nov;139(21):3962-8. doi: 10.1242/dev.084327.
5
Temporal dynamics, spatial range, and transcriptional interpretation of the Dorsal morphogen gradient. Dorsal 形态发生素梯度的时间动态、空间范围和转录解释。
Curr Opin Genet Dev. 2012 Dec;22(6):542-6. doi: 10.1016/j.gde.2012.08.005. Epub 2012 Sep 13.
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Coordinated lumen contraction and expansion during vulval tube morphogenesis in Caenorhabditis elegans.协调管形态发生过程中阴门管收缩和扩张。
Dev Cell. 2012 Sep 11;23(3):494-506. doi: 10.1016/j.devcel.2012.06.019.
7
RAS/ERK pathway transcriptional regulation through ETS/AP-1 binding sites.通过ETS/AP-1结合位点进行的RAS/ERK途径转录调控。
Small GTPases. 2012 Jul-Sep;3(3):154-8. doi: 10.4161/sgtp.19630. Epub 2012 Jun 1.
8
The Capicua repressor--a general sensor of RTK signaling in development and disease.Capicua 抑制因子——一种在发育和疾病中普遍感知 RTK 信号的传感器。
J Cell Sci. 2012 Mar 15;125(Pt 6):1383-91. doi: 10.1242/jcs.092965.
9
Pattern formation by graded and uniform signals in the early Drosophila embryo.果蝇胚胎早期通过分级和均匀信号进行形态发生。
Biophys J. 2012 Feb 8;102(3):427-33. doi: 10.1016/j.bpj.2011.12.042. Epub 2012 Feb 7.
10
Lateral gene expression in Drosophila early embryos is supported by Grainyhead-mediated activation and tiers of dorsally-localized repression.果蝇早期胚胎中的侧向基因表达受 Grainyhead 介导的激活和背部定位抑制的层次支持。
PLoS One. 2011;6(12):e29172. doi: 10.1371/journal.pone.0029172. Epub 2011 Dec 22.

ERK 信号对基因去阻遏的动力学。

Kinetics of gene derepression by ERK signaling.

机构信息

Department of Chemical and Biological Engineering and Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA.

出版信息

Proc Natl Acad Sci U S A. 2013 Jun 18;110(25):10330-5. doi: 10.1073/pnas.1303635110. Epub 2013 Jun 3.

DOI:10.1073/pnas.1303635110
PMID:23733957
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3690897/
Abstract

ERK controls gene expression in development, but mechanisms that link ERK activation to changes in transcription are not well understood. We used high-resolution analysis of signaling dynamics to study transcriptional interpretation of ERK signaling during Drosophila embryogenesis, at a stage when ERK induces transcription of intermediate neuroblasts defective (ind), a gene essential for patterning of the nerve cord. ERK induces ind by antagonizing its repression by Capicua (Cic), a transcription factor that acts as a sensor of receptor tyrosine kinases in animal development and human diseases. A recent study established that active ERK reduces the nuclear levels of Cic, but it remained unclear whether this is required for the induction of Cic target genes. We provide evidence that Cic binding sites within the regulatory DNA of ind control the spatial extent and the timing of ind expression. At the same time, we demonstrate that ERK induces ind before Cic levels in the nucleus are reduced. Based on this, we propose that ERK-dependent relief of gene repression by Cic is a two-step process, in which fast reduction of repressor activity is followed by slower changes in nuclear localization and overall protein levels. This may be a common feature of systems in which ERK induces genes by relief of transcriptional repression.

摘要

ERK 控制着发育过程中的基因表达,但 ERK 激活与转录变化之间的联系机制还不太清楚。我们使用高分辨率的信号动态分析来研究果蝇胚胎发生过程中 ERK 信号转导对转录的转录解释,此时 ERK 诱导中间神经母细胞缺陷(ind)的转录,ind 是神经索模式形成所必需的基因。ERK 通过拮抗其抑制因子 Capicua(Cic)来诱导 ind,Cic 是一种转录因子,在动物发育和人类疾病中作为受体酪氨酸激酶的传感器发挥作用。最近的一项研究确定,活性 ERK 降低了 Cic 的核内水平,但 ERK 是否需要降低 Cic 靶基因的核内水平尚不清楚。我们提供的证据表明,ind 调控 DNA 中的 Cic 结合位点控制着 ind 表达的空间范围和时间。同时,我们证明 ERK 在核内 Cic 水平降低之前诱导 ind 的表达。基于这一点,我们提出 ERK 依赖性 Cic 解除基因抑制是一个两步过程,其中快速降低抑制剂的活性,随后是核定位和整体蛋白水平的缓慢变化。这可能是 ERK 通过解除转录抑制诱导基因的系统的一个共同特征。