Patel Aleena L, Zhang Lili, Keenan Shannon E, Rushlow Christine A, Fradin Cécile, Shvartsman Stanislav Y
Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ 08540, USA; Department of Molecular Biology, Princeton University, Princeton, NJ 08540, USA; Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08540, USA.
Department of Physics and Astronomy, McMaster University, Hamilton, ON L8S 4K1, Canada.
Curr Biol. 2021 Aug 23;31(16):3639-3647.e5. doi: 10.1016/j.cub.2021.05.061. Epub 2021 Jun 23.
Even though transcriptional repressors are studied with ever-increasing molecular resolution, the temporal aspects of gene repression remain poorly understood. Here, we address the dynamics of transcriptional repression by Capicua (Cic), which is essential for normal development and is commonly mutated in human cancers and neurodegenerative diseases. We report the speed limit for Cic-dependent gene repression based on live imaging and optogenetic perturbations in the early Drosophila embryo, where Cic was originally discovered. Our measurements of Cic concentration and intranuclear mobility, along with real-time monitoring of the activity of Cic target genes, reveal remarkably fast transcriptional repression within minutes of removing an optogenetic de-repressive signal. In parallel, quantitative analyses of transcriptional bursting of Cic target genes support a repression mechanism providing a fast-acting brake on burst generation. This work sets quantitative constraints on potential mechanisms for gene regulation by Cic.
尽管对转录抑制因子的研究在分子分辨率上不断提高,但基因抑制的时间方面仍知之甚少。在这里,我们研究了Capicua(Cic)介导的转录抑制动力学,Cic对正常发育至关重要,并且在人类癌症和神经退行性疾病中经常发生突变。我们基于在早期果蝇胚胎中的实时成像和光遗传学扰动报告了Cic依赖性基因抑制的速度限制,Cic最初就是在果蝇胚胎中被发现的。我们对Cic浓度和核内迁移率的测量,以及对Cic靶基因活性的实时监测,揭示了在去除光遗传学去抑制信号后的几分钟内,转录抑制速度极快。同时,对Cic靶基因转录爆发的定量分析支持了一种抑制机制,该机制对爆发的产生起到快速制动作用。这项工作为Cic调控基因的潜在机制设定了定量限制。