Department of Biochemistry and Molecular Biology, University of Maryland Baltimore, Baltimore, Maryland, USA.
J Virol. 2013 Aug;87(15):8713-25. doi: 10.1128/JVI.01008-13. Epub 2013 Jun 5.
Pseudomonas aeruginosa myovirus KZ has a 270-kb genome within a T=27 icosahedral capsid that contains a large, unusual, and structurally well-defined protein cylindrical inner body (IB) spanning its interior. Proteolysis forms a pivotal stage in KZ head and IB morphogenesis, with the protease gp175 cleaving at least 19 of 49 different head proteins, including the major capsid protein and five major structural IB proteins. Here we show that the purified mature form of gp175 is active and cleaves purified IB structural proteins gp93 and gp89. Expression vector synthesis and purification of the zymogen/precursor yielded an active, mature-length protease, showing independent C-terminal gp175 self-cleavage autoactivation. Mutation of either the predicted catalytic serine or histidine inactivated mature gp175, supporting its classification as a serine protease and representing the first such direct biochemical demonstration with purified protease and substrate proteins for any phage protease. These mutations also blocked self-cleavage of the precursor while allowing intermolecular gp175 processing. To confirm the cleavage specificity of gp175, we mutated three cleavage sites in gp93, which blocked proteolysis at these sites. The N-terminal propeptide of gp93 was shown to undergo more extensive proteolysis than previously identified. We found that proteolysis in gp93 progressed from the N to C terminus, while blocking cleavage sites slowed but did not eliminate downstream proteolysis. These findings were shown by informatics to be relevant to the head morphogenesis of numbers of other related IB-containing giant phages as well as to T4 and herpesviruses, which have homologous proteases.
铜绿假单胞菌肌病毒 KZ 的基因组大小为 270kb,基因组包裹在一个 T=27 的二十面体衣壳内,衣壳内含有一个巨大的、异常的、结构上明确的蛋白质圆柱形内体(IB)。蛋白水解作用是 KZ 头部和 IB 形态发生的关键阶段,蛋白酶 gp175 至少切割 49 种不同头部蛋白中的 19 种,包括主要衣壳蛋白和 5 种主要结构 IB 蛋白。在这里,我们表明纯化的成熟形式的 gp175 是有活性的,可以切割纯化的 IB 结构蛋白 gp93 和 gp89。表达载体合成和前体的纯化产生了一种活性的、成熟长度的蛋白酶,表明 gp175 独立的 C 端自我切割自动激活。预测的催化丝氨酸或组氨酸的突变使成熟的 gp175 失活,支持其被归类为丝氨酸蛋白酶,并代表了第一个用纯化的蛋白酶和底物蛋白对任何噬菌体蛋白酶进行的直接生化证明。这些突变也阻止了前体的自我切割,同时允许分子间 gp175 加工。为了确认 gp175 的切割特异性,我们突变了 gp93 中的三个切割位点,这些突变阻止了这些位点的蛋白水解。gp93 的 N 端前肽被证明比以前鉴定的更广泛地进行蛋白水解。我们发现 gp93 中的蛋白水解从 N 端到 C 端进行,而阻断切割位点会减缓但不会消除下游的蛋白水解。这些发现通过信息学表明与许多其他相关的含有 IB 的巨型噬菌体以及 T4 和疱疹病毒的头部形态发生有关,这些病毒具有同源蛋白酶。